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Purpose: Separation of different CEST signals in the Z-spectrum is a challenge especially at low field strengths where amide, amine, and NOE peaks coalesce with each other or with the water peak. The purpose of this work is to investigate…

Purpose: To develop an automated machine-learning-based method for the discovery of rapid and quantitative chemical exchange saturation transfer (CEST) MR fingerprinting acquisition and reconstruction protocols. Methods: An MR physics…

Medical Physics · Physics 2022-02-01 Or Perlman , Bo Zhu , Moritz Zaiss , Matthew S. Rosen , Christian T. Farrar

Purpose: To substantially shorten the acquisition time required for quantitative 3D chemical exchange saturation transfer (CEST) and semisolid magnetization transfer (MT) imaging and allow for rapid chemical exchange parameter map…

Chemical exchange saturation transfer (CEST) MRI is a non-invasive imaging modality for detecting metabolites. It offers higher resolution and sensitivity compared to conventional magnetic resonance spectroscopy (MRS). However,…

Machine Learning · Computer Science 2026-02-09 Christof Duhme , Chris Lippe , Verena Hoerr , Xiaoyi Jiang

CEST has proven to be a valuable technique for the detection of hyperpolarized xenon-based functionalized contrast agents. Additional information can be encoded in the spectral dimension, allowing the simultaneous detection of multiple…

Medical Physics · Physics 2013-05-28 Jörg Döpfert , Christopher Witte , Martin Kunth , Leif Schröder

$\textbf{Purpose}$: To develop a clinical CEST MR fingerprinting (CEST-MRF) method for brain tumor quantification using EPI acquisition and deep learning reconstruction. $\textbf{Methods}$: A CEST-MRF pulse sequence originally designed for…

Purpose: To develop and validate a framework for rapid, accurate, and reproducible whole-brain, multi-pool chemical exchange saturation transfer (CEST) imaging at 3T, addressing challenges of long acquisition times and confounding factors.…

Medical Physics · Physics 2025-09-16 Yupeng Wu , Siyuan Fang , Siyuan Wang , Caixia Fu , Jianqi Li

Purpose: To develop a fast magnetic resonance fingerprinting (MRF) method for quantitative chemical exchange saturation transfer (CEST) imaging. Methods: We implemented a CEST-MRF method to quantify the chemical exchange rate and volume…

Medical Physics · Physics 2024-07-17 Ouri Cohen , Shuning Huang , Michael T. McMahon , Matthew S. Rosen , Christian T. Farrar

Machine learning (ML) has been increasingly used to quantify chemical exchange saturation transfer (CEST) effect. ML models are typically trained using either measured data or fully simulated data. However, training with measured data often…

Medical Physics · Physics 2023-12-15 Malvika Viswanathan , Leqi Yin , Yashwant Kurmi , Zhongliang Zu

The onset of rheumatic diseases such as rheumatoid arthritis is typically subclinical, which results in challenging early detection of the disease. However, characteristic changes in the anatomy can be detected using imaging techniques such…

Chemical Exchange Saturation Transfer (CEST) MRI enables molecular-level visualization of low-concentration metabolites by leveraging proton exchange dynamics. However, its clinical translation is hindered by inherent challenges: spatially…

Computer Vision and Pattern Recognition · Computer Science 2025-11-26 Chu Chen , Aitor Artola , Yang Liu , Se Weon Park , Raymond H. Chan , Jean-Michel Morel , Kannie W. Y. Chan

Chemical Species Tomography (CST) has been widely used for in situ imaging of critical parameters, e.g. species concentration and temperature, in reactive flows. However, even with state-of-the-art computational algorithms the method is…

Image and Video Processing · Electrical Eng. & Systems 2021-04-06 Yunfan Jiang , Jingjing Si , Rui Zhang , Godwin Enemali , Bin Zhou , Hugh McCann , Chang Liu

Chemical Exchange Saturation Transfer (CEST) MRI demonstrates its capability in significantly enhancing the detection of proteins and metabolites with low concentrations through exchangeable protons. The clinical application of CEST,…

Image and Video Processing · Electrical Eng. & Systems 2024-07-10 Chu Chen , Yang Liu , Se Weon Park , Jizhou Li , Kannie W. Y. Chan , Raymond H. F. Chan

Deep neural networks for event-based video reconstruction often suffer from a lack of interpretability and have high memory demands. A lightweight network called CISTA-LSTC has recently been introduced showing that high-quality…

Computer Vision and Pattern Recognition · Computer Science 2024-03-19 Siying Liu , Pier Luigi Dragotti

Endogenous chemical exchange saturation transfer (CEST) effects are always diluted by competing effects such as direct water proton saturation (spillover) and macromolecular magnetization transfer (MT). This leads to T2-and MT-shine-through…

Purpose: To improve the image quality of highly accelerated multi-channel MRI data by learning a joint variational network that reconstructs multiple clinical contrasts jointly. Methods: Data from our multi-contrast acquisition was embedded…

Image and Video Processing · Electrical Eng. & Systems 2019-10-09 Daniel Polak , Stephen Cauley , Berkin Bilgic , Enhao Gong , Peter Bachert , Elfar Adalsteinsson , Kawin Setsompop

Purpose: To allow fast and high-quality reconstruction of clinical accelerated multi-coil MR data by learning a variational network that combines the mathematical structure of variational models with deep learning. Theory and Methods:…

Computer Vision and Pattern Recognition · Computer Science 2017-04-04 Kerstin Hammernik , Teresa Klatzer , Erich Kobler , Michael P Recht , Daniel K Sodickson , Thomas Pock , Florian Knoll

Several machine learning techniques for accurate detection of skin cancer from medical images have been reported. Many of these techniques are based on pre-trained convolutional neural networks (CNNs), which enable training the models based…

Computer Vision and Pattern Recognition · Computer Science 2021-05-18 Aqsa Saeed Qureshi , Teemu Roos

Cellular Electron Cryo-Tomography (CECT) is a powerful imaging technique for the 3D visualization of cellular structure and organization at submolecular resolution. It enables analyzing the native structures of macromolecular complexes and…

Quantitative Methods · Quantitative Biology 2018-05-16 Chang Liu , Xiangrui Zeng , Ruogu Lin , Xiaodan Liang , Zachary Freyberg , Eric Xing , Min Xu

Purpose: Iterative Convolutional Neural Networks (CNNs) which resemble unrolled learned iterative schemes have shown to consistently deliver state-of-the-art results for image reconstruction problems across different imaging modalities.…

Machine Learning · Computer Science 2022-03-07 Andreas Kofler , Markus Haltmeier , Tobias Schaeffter , Christoph Kolbitsch
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