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This paper is a self-contained development of an invariant of graphs embedded in three-dimensional Euclidean space using the Jones polynomial and skein theory. Some examples of the invariant are computed. An unlinked embedded graph is one…

Quantum Algebra · Mathematics 2007-05-23 John W. Barrett

The exponential family of random graphs represents an important and challenging class of network models. Despite their flexibility, conventionally used exponential random graphs have one shortcoming. They cannot directly model weighted…

Probability · Mathematics 2016-07-15 Mei Yin

Hypergraphs are structures that can be decomposed or described; in other words they are recursively countable. Here, we get exact and asymptotic enumeration results on hypergraphs by means of exponential generating functions. The number of…

Discrete Mathematics · Computer Science 2008-06-20 Tsiriniaina Andriamampianina

Graph vertex embeddings based on random walks have become increasingly influential in recent years, showing good performance in several tasks as they efficiently transform a graph into a more computationally digestible format while…

Machine Learning · Statistics 2021-07-22 Dominik Kloepfer , Angelica I. Aviles-Rivero , Daniel Heydecker

In this work we give precise asymptotic expressions on the probability of the existence of fixed-size components at the threshold of connectivity for random geometric graphs.

Discrete Mathematics · Computer Science 2008-07-23 J. Diaz , D. Mitsche , X. Perez

Let $d \geq 3$ be a fixed integer. We give an asympotic formula for the expected number of spanning trees in a uniformly random $d$-regular graph with $n$ vertices. (The asymptotics are as $n\to\infty$, restricted to even $n$ if $d$ is…

Combinatorics · Mathematics 2024-05-31 Catherine Greenhill , Matthew Kwan , David Wind

There has been much recent interest in random graphs sampled uniformly from the n-vertex graphs in a suitable structured class, such as the class of all planar graphs. Here we consider a general 'bridge-addable' class of graphs - if a graph…

Combinatorics · Mathematics 2012-08-02 Colin McDiarmid

In an $\mathsf{L}$-embedding of a graph, each vertex is represented by an $\mathsf{L}$-segment, and two segments intersect each other if and only if the corresponding vertices are adjacent in the graph. If the corner of each…

Computational Geometry · Computer Science 2017-03-07 Abu Reyan Ahmed , Felice De Luca , Sabin Devkota , Alon Efrat , Md Iqbal Hossain , Stephen Kobourov , Jixian Li , Sammi Abida Salma , Eric Welch

We propose generalizations of a number of standard network models, including the classic random graph, the configuration model, and the stochastic block model, to the case of time-varying networks. We assume that the presence and absence of…

Social and Information Networks · Computer Science 2018-05-02 Xiao Zhang , Cristopher Moore , M. E. J. Newman

We consider the problem of embedding the nodes of a hypergraph into Euclidean space under the assumption that the interactions arose through closeness to unknown hyperedge centres. In this way, we tackle the inverse problem associated with…

Social and Information Networks · Computer Science 2025-09-11 Francesco Zigliotto , Desmond J. Higham

Popular network models such as the mixed membership and standard stochastic block model are known to exhibit distinct geometric structure when embedded into $\mathbb{R}^{d}$ using spectral methods. The resulting point cloud concentrates…

Statistics Theory · Mathematics 2021-10-15 Vinesh Solanki , Patrick Rubin-Delanchy , Ian Gallagher

A network embedding is a representation of a large graph in a low-dimensional space, where vertices are modeled as vectors. The objective of a good embedding is to preserve the proximity between vertices in the original graph. This way,…

Artificial Intelligence · Computer Science 2017-01-20 Zhipeng Huang , Nikos Mamoulis

A method for embedding graphs in Euclidean space is suggested. The method connects nodes to their geographically closest neighbors and economizes on the total physical length of links. The topological and geometrical properties of…

Condensed Matter · Physics 2007-05-23 Daniel ben-Avraham , Alejandro F. Rozenfeld , Reuven Cohen , Shlomo Havlin

We investigate a class of random graph ensembles based on the Feynman graphs of multidimensional integrals, representing statistical-mechanical partition functions. We show that the resulting ensembles of random graphs strongly resemble…

Statistical Mechanics · Physics 2015-06-25 Bo Soderberg

Many real-world applications give rise to large heterogeneous networks where nodes and edges can be of any arbitrary type (e.g., user, web page, location). Special cases of such heterogeneous graphs include homogeneous graphs, bipartite,…

Social and Information Networks · Computer Science 2019-05-14 Ryan A. Rossi , Nesreen K. Ahmed , Aldo Carranza , David Arbour , Anup Rao , Sungchul Kim , Eunyee Koh

Spectral embedding finds vector representations of the nodes of a network, based on the eigenvectors of a properly constructed matrix, and has found applications throughout science and technology. Many networks are multipartite, meaning…

Methodology · Statistics 2025-10-27 Alexander Modell , Ian Gallagher , Joshua Cape , Patrick Rubin-Delanchy

We propose a two-body spherically symmetric (isotropic) potential such that particles interacting by the potential self assemble into linear semiflexible polymeric chains without branching. By suitable control of the potential parameters we…

Soft Condensed Matter · Physics 2018-05-09 Alex Abraham , Apratim Chatterji

Random geometric graphs consist of randomly distributed nodes (points), with pairs of nodes within a given mutual distance linked. In the usual model the distribution of nodes is uniform on a square, and in the limit of infinitely many…

Disordered Systems and Neural Networks · Physics 2018-09-27 Carl P. Dettmann

We propose a neural embedding algorithm called Network Vector, which learns distributed representations of nodes and the entire networks simultaneously. By embedding networks in a low-dimensional space, the algorithm allows us to compare…

Social and Information Networks · Computer Science 2017-09-11 Hao Wu , Kristina Lerman

A book Chapter consisting of some of the main areas of research in graph theory applied to physics. It includes graphs in condensed matter theory, such as the tight-binding and the Hubbard model. It follows the study of graph theory and…

Mathematical Physics · Physics 2013-06-19 Ernesto Estrada
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