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Early infancy is a rapid and dynamic neurodevelopmental period for behavior and neurocognition. Longitudinal magnetic resonance imaging (MRI) is an effective tool to investigate such a crucial stage by capturing the developmental…

Image and Video Processing · Electrical Eng. & Systems 2024-02-22 Lianghu Guo , Tianli Tao , Xinyi Cai , Zihao Zhu , Jiawei Huang , Lixuan Zhu , Zhuoyang Gu , Haifeng Tang , Rui Zhou , Siyan Han , Yan Liang , Qing Yang , Dinggang Shen , Han Zhang

The accurate segmentation of retinal blood vessels plays a crucial role in the early diagnosis and treatment of various ophthalmic diseases. Designing a network model for this task requires meticulous tuning and extensive experimentation to…

Image and Video Processing · Electrical Eng. & Systems 2024-11-19 Tingting Wu , Ruyi Min , Peixuan Song , Hengtao Guo , Tieyong Zeng , Feng-Lei Fan

We propose a segmentation framework that uses deep neural networks and introduce two innovations. First, we describe a biophysics-based domain adaptation method. Second, we propose an automatic method to segment white and gray matter, and…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Amir Gholami , Shashank Subramanian , Varun Shenoy , Naveen Himthani , Xiangyu Yue , Sicheng Zhao , Peter Jin , George Biros , Kurt Keutzer

Automatic segmentation of brain Magnetic Resonance Imaging (MRI) images is one of the vital steps for quantitative analysis of brain for further inspection. In this paper, NeuroNet has been adopted to segment the brain tissues (white matter…

Computer Vision and Pattern Recognition · Computer Science 2019-04-02 Fakrul Islam Tushar , Basel Alyafi , Md. Kamrul Hasan , Lavsen Dahal

Accurate fetal brain tissue segmentation and biometric analysis are essential for studying brain development in utero. The FeTA Challenge 2024 advanced automated fetal brain MRI analysis by introducing biometry prediction as a new task…

Accurate brain tissue segmentation in Magnetic Resonance Imaging (MRI) has attracted the attention of medical doctors and researchers since variations in tissue volume help in diagnosing and monitoring neurological diseases. Several…

Computer Vision and Pattern Recognition · Computer Science 2019-07-30 Jose Bernal , Kaisar Kushibar , Mariano Cabezas , Sergi Valverde , Arnau Oliver , Xavier Lladó

Quantitative, volumetric analysis of Magnetic Resonance Imaging (MRI) is a fundamental way researchers study the brain in a host of neurological conditions including normal maturation and aging. Despite the availability of open-source brain…

Quantitative Methods · Quantitative Biology 2019-11-15 Aakash Kaku , Chaitra V. Hegde , Jeffrey Huang , Sohae Chung , Xiuyuan Wang , Matthew Young , Alireza Radmanesh , Yvonne W. Lui , Narges Razavian

Diffusion-weighted Magnetic Resonance Imaging (dMRI) is increasingly used to study the fetal brain in utero. An important computation enabled by dMRI is streamline tractography, which has unique applications such as tract-specific analysis…

Computer Vision and Pattern Recognition · Computer Science 2024-03-06 Camilo Calixto , Camilo Jaimes , Matheus D. Soldatelli , Simon K. Warfield , Ali Gholipour , Davood Karimi

Effective, robust, and automatic tools for brain tumor segmentation are needed for the extraction of information useful in treatment planning from magnetic resonance (MR) images. Context-aware artificial intelligence is an emerging concept…

Image and Video Processing · Electrical Eng. & Systems 2022-03-07 Iulian Emil Tampu , Neda Haj-Hosseini , Anders Eklund

MR images of the fetus allow non-invasive analysis of the fetal brain. Quantitative analysis of fetal brain development requires automatic brain tissue segmentation that is typically preceded by segmentation of the intracranial volume…

Computer Vision and Pattern Recognition · Computer Science 2017-08-09 N. Khalili , P. Moeskops , N. H. P. Claessens , S. Scherpenzeel , E. Turk , R. de Heus , M. J. N. L. Benders , M. A. Viergever , J. P. W. Pluim , I. Išgum

We propose a new generative adversarial architecture to mitigate imbalance data problem in medical image semantic segmentation where the majority of pixels belongs to a healthy region and few belong to lesion or non-health region. A model…

Computer Vision and Pattern Recognition · Computer Science 2018-10-10 Mina Rezaei , Haojin Yang , Christoph Meinel

Accurate segmentation of MR brain tissue is a crucial step for diagnosis,surgical planning, and treatment of brain abnormalities. However,it is a time-consuming task to be performed by medical experts. So, automatic and reliable…

Computer Vision and Pattern Recognition · Computer Science 2018-07-31 Yang Deng , Yao Sun , Yongpei Zhu , Mingwang Zhu , Wei Han , Kehong Yuan

Spatio-temporal fetal brain atlases are important for characterizing normative neurodevelopment and identifying congenital anomalies. However, existing atlas construction pipelines necessitate days for slice-to-volume reconstruction (SVR)…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Xiaotian Hu , Mingxuan Liu , Hongjia Yang , Juncheng Zhu , Yijin Li , Yifei Chen , Haoxiang Li , Tongxi Song , Zihan Li , Yingqi Hao , Ziyu Li , Yujin Zhang , Gang Ning , Yi Liao , Haibo Qu , Qiyuan Tian

Automated brain tissue segmentation into white matter (WM), gray matter (GM), and cerebro-spinal fluid (CSF) from magnetic resonance images (MRI) is helpful in the diagnosis of neuro-disorders such as epilepsy, Alzheimer's, multiple…

Computer Vision and Pattern Recognition · Computer Science 2018-06-13 Pulkit Kumar , Pravin Nagar , Chetan Arora , Anubha Gupta

Most segmentation methods in child brain MRI are supervised and are based on global intensity distributions of major brain structures. The successful implementation of a supervised approach depends on availability of an age-appropriate…

Image and Video Processing · Electrical Eng. & Systems 2020-05-21 Nataliya Portman , Paule-J Toussaint , Alan C. Evans

Accurate medical image segmentation is essential for diagnosis and treatment planning of diseases. Convolutional Neural Networks (CNNs) have achieved state-of-the-art performance for automatic medical image segmentation. However, they are…

Image and Video Processing · Electrical Eng. & Systems 2020-11-05 Ran Gu , Guotai Wang , Tao Song , Rui Huang , Michael Aertsen , Jan Deprest , Sébastien Ourselin , Tom Vercauteren , Shaoting Zhang

We present a novel approach to automatically segment magnetic resonance (MR) images of the human brain into anatomical regions. Our methodology is based on a deep artificial neural network that assigns each voxel in an MR image of the brain…

Computer Vision and Pattern Recognition · Computer Science 2015-06-26 Alexandre de Brebisson , Giovanni Montana

Fetal brain magnetic resonance imaging (MRI) offers exquisite images of the developing brain but is not suitable for anomaly screening. For this ultrasound (US) is employed. While expert sonographers are adept at reading US images, MR…

Computer Vision and Pattern Recognition · Computer Science 2019-09-19 Jianbo Jiao , Ana I. L. Namburete , Aris T. Papageorghiou , J. Alison Noble

Deep learning has made significant strides in automated brain tumor segmentation from magnetic resonance imaging (MRI) scans in recent years. However, the reliability of these tools is hampered by the presence of poor-quality segmentation…

Image and Video Processing · Electrical Eng. & Systems 2025-07-08 Peijie Qiu , Satrajit Chakrabarty , Phuc Nguyen , Soumyendu Sekhar Ghosh , Aristeidis Sotiras

Functional Magnetic Resonance Imaging (fMRI) is an imaging technique widely used to study human brain activity. fMRI signals in areas across the brain transiently synchronise and desynchronise their activity in a highly structured manner,…

Machine Learning · Computer Science 2025-08-12 Yiran Huang , Amirhossein Nouranizadeh , Christine Ahrends , Mengjia Xu
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