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Medical image interpretation using deep learning has shown promise but often requires extensive expert-annotated datasets. To reduce this annotation burden, we develop an Image-Graph Contrastive Learning framework that pairs chest X-rays…

Image and Video Processing · Electrical Eng. & Systems 2024-05-17 Sameer Khanna , Daniel Michael , Marinka Zitnik , Pranav Rajpurkar

Radiology report generation aims at generating descriptive text from radiology images automatically, which may present an opportunity to improve radiology reporting and interpretation. A typical setting consists of training encoder-decoder…

Computation and Language · Computer Science 2021-09-28 An Yan , Zexue He , Xing Lu , Jiang Du , Eric Chang , Amilcare Gentili , Julian McAuley , Chun-Nan Hsu

Automated analysis of chest radiography using deep learning has tremendous potential to enhance the clinical diagnosis of diseases in patients. However, deep learning models typically require large amounts of annotated data to achieve high…

Computer Vision and Pattern Recognition · Computer Science 2023-04-10 Keegan Quigley , Miriam Cha , Ruizhi Liao , Geeticka Chauhan , Steven Horng , Seth Berkowitz , Polina Golland

A key challenge in training neural networks for a given medical imaging task is often the difficulty of obtaining a sufficient number of manually labeled examples. In contrast, textual imaging reports, which are often readily available in…

Machine Learning · Computer Science 2022-01-31 Gongbo Liang , Connor Greenwell , Yu Zhang , Xiaoqin Wang , Ramakanth Kavuluru , Nathan Jacobs

Automatic extraction of medical conditions from free-text radiology reports is critical for supervising computer vision models to interpret medical images. In this work, we show that radiologists labeling reports significantly disagree with…

Image and Video Processing · Electrical Eng. & Systems 2021-03-16 Saahil Jain , Akshay Smit , Steven QH Truong , Chanh DT Nguyen , Minh-Thanh Huynh , Mudit Jain , Victoria A. Young , Andrew Y. Ng , Matthew P. Lungren , Pranav Rajpurkar

The automation of chest X-ray reporting has garnered significant interest due to the time-consuming nature of the task. However, the clinical accuracy of free-text reports has proven challenging to quantify using natural language processing…

Computer Vision and Pattern Recognition · Computer Science 2023-05-03 Matthias Keicher , Kamilia Zaripova , Tobias Czempiel , Kristina Mach , Ashkan Khakzar , Nassir Navab

Building a highly accurate predictive model for classification and localization of abnormalities in chest X-rays usually requires a large number of manually annotated labels and pixel regions (bounding boxes) of abnormalities. However, it…

Computer Vision and Pattern Recognition · Computer Science 2022-05-06 Yan Han , Chongyan Chen , Ahmed Tewfik , Benjamin Glicksberg , Ying Ding , Yifan Peng , Zhangyang Wang

Open-set recognition generalizes a classification task by classifying test samples as one of the known classes from training or "unknown." As novel cancer drug cocktails with improved treatment are continually discovered, predicting cancer…

Machine Learning · Computer Science 2022-01-11 Alexander Cao , Diego Klabjan , Yuan Luo

The proliferation of Deep Learning (DL)-based methods for radiographic image analysis has created a great demand for expert-labeled radiology data. Recent self-supervised frameworks have alleviated the need for expert labeling by obtaining…

Computer Vision and Pattern Recognition · Computer Science 2023-03-27 S. A. Rizvi , R. Tang , X. Jiang , X. Ma , X. Hu

Learning visual representations of medical images (e.g., X-rays) is core to medical image understanding but its progress has been held back by the scarcity of human annotations. Existing work commonly relies on fine-tuning weights…

Computer Vision and Pattern Recognition · Computer Science 2022-09-21 Yuhao Zhang , Hang Jiang , Yasuhide Miura , Christopher D. Manning , Curtis P. Langlotz

Obtaining automated preliminary read reports for common exams such as chest X-rays will expedite clinical workflows and improve operational efficiencies in hospitals. However, the quality of reports generated by current automated approaches…

Self-supervised learning has proven to be an effective way to learn representations in domains where annotated labels are scarce, such as medical imaging. A widely adopted framework for this purpose is contrastive learning and it has been…

Computer Vision and Pattern Recognition · Computer Science 2024-02-23 Hugo Figueiras , Helena Aidos , Nuno Cruz Garcia

Although machine learning has become a powerful tool to augment doctors in clinical analysis, the immense amount of labeled data that is necessary to train supervised learning approaches burdens each development task as time and resource…

Automated diagnostic assistants in healthcare necessitate accurate AI models that can be trained with limited labeled data, can cope with severe class imbalances and can support simultaneous prediction of multiple disease conditions. To…

Computer Vision and Pattern Recognition · Computer Science 2021-02-11 Deepta Rajan , Jayaraman J. Thiagarajan , Alexandros Karargyris , Satyananda Kashyap

Current 3D semi-supervised segmentation methods face significant challenges such as limited consideration of contextual information and the inability to generate reliable pseudo-labels for effective unsupervised data use. To address these…

Computer Vision and Pattern Recognition · Computer Science 2023-11-22 Sanaz Karimijafarbigloo , Reza Azad , Yury Velichko , Ulas Bagci , Dorit Merhof

Radiologists are in short supply globally, and deep learning models offer a promising solution to address this shortage as part of clinical decision-support systems. However, training such models often requires expensive and time-consuming…

Computation and Language · Computer Science 2023-07-10 Alessandro Wollek , Philip Haitzer , Thomas Sedlmeyr , Sardi Hyska , Johannes Rueckel , Bastian Sabel , Michael Ingrisch , Tobias Lasser

The field of medical diagnostics contains a wealth of challenges which closely resemble classical machine learning problems; practical constraints, however, complicate the translation of these endpoints naively into classical architectures.…

Computer Vision and Pattern Recognition · Computer Science 2018-02-05 Li Yao , Eric Poblenz , Dmitry Dagunts , Ben Covington , Devon Bernard , Kevin Lyman

Automatic radiology reporting has great clinical potential to relieve radiologists from heavy workloads and improve diagnosis interpretation. Recently, researchers have enhanced data-driven neural networks with medical knowledge graphs to…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 Mingjie Li , Bingqian Lin , Zicong Chen , Haokun Lin , Xiaodan Liang , Xiaojun Chang

Decision support tools that rely on supervised learning require large amounts of expert annotations. Using past radiological reports obtained from hospital archiving systems has many advantages as training data above manual single-class…

Machine Learning · Computer Science 2021-05-21 Aydan Gasimova

Beyond their primary diagnostic purpose, radiology reports have been an invaluable source of information in medical research. Given a corpus of radiology reports, researchers are often interested in identifying a subset of reports…

Computation and Language · Computer Science 2021-12-21 Tamara Katic , Martin Pavlovski , Danijela Sekulic , Slobodan Vucetic
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