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We provide a simple new randomized contraction approach to the global minimum cut problem for simple undirected graphs. The contractions exploit 2-out edge sampling from each vertex rather than the standard uniform edge sampling. We…

Data Structures and Algorithms · Computer Science 2019-09-04 Mohsen Ghaffari , Krzysztof Nowicki , Mikkel Thorup

Recent innovations in reconstructing large scale, full-precision, neuron-synapse-scale connectomes demand subsequent improvements to graph analysis methods to keep up with the growing complexity and size of the data. One such tool is the…

Quantitative Methods · Quantitative Biology 2025-04-25 Felix Windisch , Florian Unger

The language of graph theory, or network science, has proven to be an exceptional tool for addressing myriad problems in neuroscience. Yet, the use of networks is predicated on a critical simplifying assumption: that the quintessential unit…

Neurons and Cognition · Quantitative Biology 2016-01-14 Chad Giusti , Robert Ghrist , Danielle S. Bassett

Graphical models or networks describe the statistical dependence among multiple variables and are widely used in biology (e.g., gene regulatory networks). Under appropriate assumptions, directed edges may represent causal relationships. A…

Methodology · Statistics 2023-11-29 Evan A Martin , Audrey Qiuyan Fu

The diameter of a strongly connected $d$-dimensional simplicial complex is the diameter of its dual graph. We provide a probabilistic proof of the existence of $d$-dimensional simplicial complexes with diameter $ (\frac{1}{d \cdot d!} -…

Combinatorics · Mathematics 2022-04-27 Tom Bohman , Andrew Newman

Higher-order connectivity in complex systems described by simplexes of different orders provides a geometry for simplex-based dynamical variables and interactions. Simplicial complexes that constitute a functional geometry of the human…

Neurons and Cognition · Quantitative Biology 2020-06-19 Miroslav Andjelkovic , Bosiljka Tadic , Roderick Melnik

We consider the count of subgraphs with an arbitrary configuration of endpoints in the random-connection model based on a Poisson point process on ${\Bbb R}^d$. We present combinatorial expressions for the computation of the cumulants and…

Probability · Mathematics 2025-07-02 Qingwei Liu , Nicolas Privault

A hypergraph can be obtained from a simplicial complex by deleting some non-maximal simplices. In this paper, we study the embedded homology as well as the homology of the (lower-)associated simplicial complexes for hypergraphs. We…

Combinatorics · Mathematics 2021-08-06 Shiquan Ren , Chong Wang , Chengyuan Wu , Jie Wu

Online social networks have emerged as useful tools to communicate or share information and news on a daily basis. One of the most popular networks is Twitter, where users connect to each other via directed follower relationships.…

Social and Information Networks · Computer Science 2022-09-07 Christoph Schweimer

Topological features based on persistent homology capture high-order structural information so as to augment graph neural network methods. However, computing extended persistent homology summaries remains slow for large and dense graphs and…

Machine Learning · Computer Science 2022-11-16 Zuoyu Yan , Tengfei Ma , Liangcai Gao , Zhi Tang , Yusu Wang , Chao Chen

A simplicial polytope is a polytope with all its facets being combinatorially equivalent to simplices. We deal with the edge connectivity of the graphs of simplicial polytopes. We first establish that, for any $d\ge 3$, for any $d\ge 3$,…

Combinatorics · Mathematics 2023-03-07 Guillermo Pineda-Villavicencio , Julien Ugon

We study topological and geometric functionals of $l_\infty$-random geometric graphs on the high-dimensional torus in a sparse regime, where the expected number of neighbors decays exponentially in the dimension. More precisely, we…

Probability · Mathematics 2025-01-08 Gilles Bonnet , Christian Hirsch , Daniel Rosen , Daniel Willhalm

The connectome, a map of the structural and/or functional connections in the brain, provides a complex representation of the neurobiological phenotypes on which it supervenes. This information-rich data modality has the potential to…

In statistical connectomics, the quantitative study of brain networks, estimating the mean of a population of graphs based on a sample is a core problem. Often, this problem is especially difficult because the sample or cohort size is…

Learning properties of large graphs from samples has been an important problem in statistical network analysis since the early work of Goodman \cite{Goodman1949} and Frank \cite{Frank1978}. We revisit a problem formulated by Frank…

Statistics Theory · Mathematics 2019-06-18 Jason M. Klusowski , Yihong Wu

We investigate the threshold probability for connectivity of sparse graphs under weak assumptions. As a corollary this completely solve the problem for Cartesian powers of arbitrary graphs. In detail, let $G$ be a connected graph on $k$…

Combinatorics · Mathematics 2013-12-04 Felix Joos

Similarity graphs are an active research direction for the nearest neighbor search (NNS) problem. New algorithms for similarity graph construction are continuously being proposed and analyzed by both theoreticians and practitioners.…

Machine Learning · Computer Science 2020-02-14 Dmitry Baranchuk , Artem Babenko

The myriad complex systems with multiway interactions motivate the extension of graph-based pairwise connections to higher-order relations. In particular, the simplicial complex has inspired generalizations of graph neural networks (GNNs)…

Machine Learning · Statistics 2023-09-15 Madeline Navarro , Santiago Segarra

We introduce a new model for random simplicial complexes which with high probability generates a complex that has a simply-connected double cover. Hence we develop a model for random simplicial complexes with fundamental group…

Combinatorics · Mathematics 2022-10-21 Florian Frick , Andrew Newman

We analyze site percolation on directed and undirected graphs with site-dependent open-site probabilities. We construct upper bounds on cluster susceptibilities, vertex connectivity functions, and the expected number of simple open cycles…

Mathematical Physics · Physics 2016-10-18 Kathleen E. Hamilton , Leonid P. Pryadko
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