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Alloy is a lightweight formal specification language, supported by an IDE, which has proven well-suited for reasoning about software design in early development stages. The IDE provides a visualizer that produces graphical representations…
The digitisation campaigns carried out by libraries and archives in recent years have facilitated access to documents in their collections. However, exploring and exploiting these documents remain difficult tasks due to the sheer quantity…
This demonstration paper presents StreamSide, an open-source toolkit for annotating multiple kinds of meaning representations. StreamSide supports frame-based annotation schemes e.g., Abstract Meaning Representation (AMR) and frameless…
Automatic documentation generation tools, or auto docs, are widely used to visualize information about APIs. However, each auto doc tool comes with its own unique representation of API information. In this paper, I use an information…
Many annotation tools have been developed, covering a wide variety of tasks and providing features like user management, pre-processing, and automatic labeling. However, all of these tools use Graphical User Interfaces, and often require…
The way we look at data has a great impact on how we can understand it, particularly when the data is related to health and wellness. Due to the increased use of self-tracking devices and the ongoing shift towards preventive medicine,…
Visualizations have become an indispensable part of the scientific process. A vibrant ecosystem of visualization tools exists, catering to a wide variety of different needs. Real-time visualizations of numerical simulations offer scientists…
GrayStar is a stellar atmospheric and spectral line modelling, post-processing, and visualisation code, suitable for classroom demonstrations and laboratory-style assignments, that has been developed in Java and deployed in JavaScript and…
Many real-world applications require automated data annotation, such as identifying tissue origins based on gene expressions and classifying images into semantic categories. Annotation classes are often numerous and subject to changes over…
BioSimplify is an open source tool written in Java that introduces and facilitates the use of a novel model for sentence simplification tuned for automatic discourse analysis and information extraction (as opposed to sentence simplification…
Visualization of multidimensional, categorical data is a common challenge across scientific areas and, in particular, the life sciences. The goal is to create a comprehensive overview of the underlying data which allows to assess multiple…
SPOT is an open source and free visual data analytics tool for multi-dimensional data-sets. Its web-based interface allows a quick analysis of complex data interactively. The operations on data such as aggregation and filtering are…
Understanding or comprehending source code is one of the core activities of software engineering. Understanding object-oriented source code is essential and required when a programmer maintains, migrates, reuses, documents or enhances…
This paper describes TOBY, a visualization tool that helps a user explore the contents of an academic survey paper. The visualization consists of four components: a hierarchical view of taxonomic data in the survey, a document similarity…
Research papers in the biomedical field come with large and complex data sets that are shared with the scientific community as unstructured data files via public data repositories. Examples are sequencing, microarray, and mass spectroscopy…
Database modeling is a key activity towards the fulfillment of storage requirements. Despite the availability of several database modeling tools for developers, these often come with associated costs, setup complexities, usability…
Black-box knowledge distillation for large language models presents a strict trade-off. Simple off-policy methods (e.g., sequence-level knowledge distillation) struggle to correct the student's inherent errors. Fully on-policy methods…
The Center for Expanded Data Annotation and Retrieval (CEDAR) aims to revolutionize the way that metadata describing scientific experiments are authored. The software we have developed--the CEDAR Workbench--is a suite of Web-based tools and…
During software maintenance, programmers spend a lot of time on code comprehension. Reading comments is an effective way for programmers to reduce the reading and navigating time when comprehending source code. Therefore, as a critical task…
The Sensor, Observation, Sample, and Actuator (SOSA) ontology provides a formal but lightweight general-purpose specification for modeling the interaction between the entities involved in the acts of observation, actuation, and sampling.…