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Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has caused an ongoing pandemic infecting 219 million people as of 10/19/21, with a 3.6% mortality rate. Natural selection can generate favorable mutations with improved fitness…

Quantitative Methods · Quantitative Biology 2021-11-04 Yingying Wu , Shusheng Xu , Shing-Tung Yau , Yi Wu

In stochastic modeling of infectious diseases, it has been established that variations in infectivity affect the probability of a major outbreak, but not the shape of the curves during a major outbreak, which is predicted by deterministic…

Physics and Society · Physics 2022-12-12 F Rousse , M Carlsson , M Ogren , B Kalischer Wellander

Background and Purpose: Coronaviruses (CoV) are perilous viruses that may cause Severe Acute Respiratory Syndrome (SARS-CoV), Middle East Respiratory Syndrome (MERS-CoV). The novel 2019 Coronavirus disease (COVID-19) was discovered as a…

Image and Video Processing · Electrical Eng. & Systems 2020-03-26 Ezz El-Din Hemdan , Marwa A. Shouman , Mohamed Esmail Karar

In light of the continuing emergence of new SARS-CoV-2 variants and vaccines, we create a simulation framework for exploring possible infection trajectories under various scenarios. The situations of primary interest involve the interaction…

Populations and Evolution · Quantitative Biology 2022-01-10 Kory D. Johnson , Annemarie Grass , Daniel Toneian , Mathias Beiglböck , Jitka Polechová

In the context of natural disasters, human responses inevitably intertwine with natural factors. The COVID-19 pandemic, as a significant stress factor, has brought to light profound variations among different countries in terms of their…

Physics and Society · Physics 2024-02-26 Innokentiy Kastalskiy , Andrei Zinovyev , Evgeny Mirkes , Victor Kazantsev , Alexander N. Gorban

Since the outbreak of the COVID-19 in December 2019, medical protective equipment such as disposable medical masks and KN95 masks have become essential resources for the public. Enterprises in all sectors of society have also transformed…

Computer Vision and Pattern Recognition · Computer Science 2022-03-28 Xiangri Lu , Zhanqing Wang , Hongbin Ma

The novel severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which causes coronavirus disease 2019 (COVID-19), is a threat to the global healthcare system and economic security. As of July 2020, no specific drugs or vaccines are…

The ongoing pandemic of Coronavirus disease (COVID-19) emerged in Wuhan, China in the end of 2019. It has already affected more than 300,000 people, with the number of deaths nearing 13000 across the world. As it has been posing a huge…

Applications · Statistics 2020-03-25 Soudeep Deb , Manidipa Majumdar

Recent outbreaks of infectious diseases have been monitored closely from an epidemiological and microbiological perspective. Extracting from this wealth of data the information that is relevant for the evolution of the pathogen and predict…

Populations and Evolution · Quantitative Biology 2024-10-10 Baptiste Filoche , Stefan Hohenegger

Viroporins are small viral proteins that oligomerize in the membrane of host cells and induce the formation of hydrophilic pores in these membranes, thus altering the physiological properties of the host cells. Due to their significance for…

Biomolecules · Quantitative Biology 2022-09-13 Antonios Kolocouris , Isaiah Arkin , Nicholas M. Glykos

Coronaviruses are membrane-enveloped, non-segmented positive-strand RNA viruses belonging to the Coronaviridae family. Various animal species, mainly mammalian and avian, are severely infected by various coronaviruses, causing serious…

Quantitative Methods · Quantitative Biology 2023-04-17 Sarwan Ali , Taslim Murad , Murray Patterson

The current outbreak of novel coronavirus disease 2019 (COVID-19) poses an unprecedented global health and economic threat to interconnected human societies. Until a vaccine is developed, strategies for controlling the outbreak rely on…

Populations and Evolution · Quantitative Biology 2022-08-24 Andrew J. Stier , Marc G. Berman , Luis M. A. Bettencourt

This work provides an overview on deterministic and stochastic models that have previously been proposed by us to study the transmission dynamics of the Coronavirus Disease 2019 (COVID-19) in Europe and USA. Briefly, we describe realistic…

Populations and Evolution · Quantitative Biology 2022-07-11 Giorgio Sonnino , Philippe Peeters , Pasquale Nardone

The coronavirus disease (COVID-19) pandemic, caused by the coronavirus SARS-CoV-2, has caused 60 millions of infections and 1.38 millions of fatalities. Genomic analysis of SARS-CoV-2 can provide insights on drug design and vaccine…

Other Quantitative Biology · Quantitative Biology 2020-11-26 Changchuan Yin , Stephen S. -T. Yau

We propose a simple model of spreading of some infection in an originally healthy population which is different from other models existing in the literature. In particular, we use an operator technique which allows us to describe in a…

Populations and Evolution · Quantitative Biology 2020-10-29 F. Bagarello , F. Gargano , F. Roccati

This paper is devoted to the multidisciplinary modelling of a pandemic initiated by an aggressive virus, specifically the so-called \textit{SARS--CoV--2 Severe Acute Respiratory Syndrome, corona virus n.2}. The study is developed within a…

Epidemics like Covid-19 and Ebola have impacted people's lives significantly. The impact of mobility of people across the countries or states in the spread of epidemics has been significant. The spread of disease due to factors local to the…

Populations and Evolution · Quantitative Biology 2022-05-04 Nirmal Kumar Sivaraman , Manas Gaur , Shivansh Baijal , Sakthi Balan Muthiah , Amit Sheth

Containing the recent West African outbreak of Ebola virus (EBOV) required the deployment of substantial global resources. Operationally, health workers and surveillance teams treated cases, collected genetic samples, and tracked case…

Populations and Evolution · Quantitative Biology 2017-12-13 Kyle B. Gustafson , Joshua L. Proctor

During 2020 and 2021, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) transmission has been increasing amongst the world's population at an alarming rate. Reducing the spread of SARS-CoV-2 and other diseases that are spread in…

Social and Information Networks · Computer Science 2022-03-22 Patrick Urrutia , David Wren , Chrysafis Vogiatzis , Ruriko Yoshida

Since the end of 2019 an outbreak of a new strain of coronavirus, called 2019--nCoV, is reported from China and later other parts of the world. Since January 21, WHO reports daily data on confirmed cases and deaths from both China and other…

Populations and Evolution · Quantitative Biology 2020-02-11 Thomas Götz