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We introduce PyTorch Geometric, a library for deep learning on irregularly structured input data such as graphs, point clouds and manifolds, built upon PyTorch. In addition to general graph data structures and processing methods, it…

Machine Learning · Computer Science 2019-04-26 Matthias Fey , Jan Eric Lenssen

Low-dose Proton Computed Tomography (pCT) is an evolving imaging modality that is used in proton therapy planning which addresses the range uncertainty problem. The goal of pCT is generating a 3D map of Relative Stopping Power (RSP)…

This work introduces CTorch, a PyTorch-compatible, GPU-accelerated, and auto-differentiable projector toolbox designed to handle various CT geometries with configurable projector algorithms. CTorch provides flexible scanner geometry…

Medical Physics · Physics 2025-12-15 Xiao Jiang , Grace J. Gang , J. Webster Stayman

Proton computed tomography (pCT) is an image modality that will improve treatment planning for patients receiving proton radiation therapy compared with the current treatment techniques, which are based on X-ray CT. Reconstruction of a pCT…

Medical Physics · Physics 2021-08-30 Micah Witt , Blake Schultze , Reinhard Schulte , Keith Schubert , Ernesto Gomez

Ptychography is a well-established coherent diffraction imaging technique that enables non-invasive imaging of samples at a nanometer scale. It has been extensively used in various areas such as the defense industry or materials science.…

Computer Vision and Pattern Recognition · Computer Science 2022-05-24 Semih Barutcu , Doğa Gürsoy , Aggelos K. Katsaggelos

In recent years, topology optimization (TO) has gained widespread attention as a powerful structural design method. However, its application remains challenging due to the deep expertise and extensive development effort required.…

Analysis of PDEs · Mathematics 2025-05-06 Liang He , Huayi Wei , Tian Tian

Computational imaging is increasingly vital for a broad spectrum of applications, ranging from biological to material sciences. This includes applications where the object is known and sufficiently sparse, allowing it to be described with a…

Image and Video Processing · Electrical Eng. & Systems 2024-01-17 Jacob Seifert , Yifeng Shao , Allard P. Mosk

While the advances in synchrotron light sources, together with the development of focusing optics and detectors, allow nanoscale ptychographic imaging of materials and biological specimens, the corresponding experiments can yield…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-05 Xiaodong Yu , Viktor Nikitin , Daniel J. Ching , Selin Aslan , Doga Gursoy , Tekin Bicer

Physics-driven artificial intelligence (PD-AI) reconstruction methods have emerged as the state-of-the-art for accelerating MRI scans, enabling higher spatial and temporal resolutions. However, the high resolution of these scans generates…

Image and Video Processing · Electrical Eng. & Systems 2025-06-05 Yaşar Utku Alçalar , Yu Cao , Mehmet Akçakaya

Set projection algorithms are a class of algorithms used in ptychography to help improve the quality of the reconstructed images. The set projection step is important because it helps to ensure that the reconstructed image satisfies the…

Signal Processing · Electrical Eng. & Systems 2023-11-21 Wenjie Mei , Andrew M. Maiden

Ptychography is a technique widely used in microscopy for achieving high-resolution imaging. This method relies on computational processing of images gathered from diffraction patterns produced by several partial illuminations of a sample.…

Optics · Physics 2022-09-07 Fabiola Salinas , M. A. Solís-Prosser

Ptychography is a promising phase retrieval technique for label-free quantitative phase imaging. Recent advances in phase retrieval algorithms witnessed the development of spectral methods, in order to accelerate gradient descent…

Optics · Physics 2021-04-07 Lorenzo Valzania , Jonathan Dong , Sylvain Gigan

Ptychography is an imaging technique that enables nanometer-scale reconstruction of complex transmittance images by scanning objects with overlapping illumination patterns. However, the illumination function is typically unknown, which…

Image and Video Processing · Electrical Eng. & Systems 2025-01-14 Qiuchen Zhai , Gregery T. Buzzard , Kevin Mertes , Brendt Wohlberg , Charles A. Bouman

In this paper, we introduce silhouette tomography, a novel formulation of X-ray computed tomography that relies only on the geometry of the imaging system. We formulate silhouette tomography mathematically and provide a simple method for…

Image and Video Processing · Electrical Eng. & Systems 2024-02-13 Evan Bell , Michael T. McCann , Marc Klasky

The most important way to achieve higher performance in computer systems is through heterogeneous computing, i.e., by adopting hardware platforms containing more than one type of processor, such as CPUs, GPUs, and FPGAs. Several types of…

Software Engineering · Computer Science 2020-05-19 Hugo Andrade , Ivica Crnkovic , Jan Bosch

We introduce a probabilistic approach to ptychographic reconstruction in computational imaging. Ptychography is an imaging method where the complex amplitude of an object is estimated from a sequence of diffraction measurements. We…

Applications · Statistics 2025-04-09 Hajime Ueda , Shun Katakami , Masato Okada

X-ray ptychography is a data-intensive imaging technique expected to become ubiquitous at next-generation light sources delivering many-fold increases in coherent flux. The need for real-time feedback under accelerated acquisition rates…

Recent advances in computing hardware and modeling software have given rise to new applications for numerical optimization. These new applications occasionally uncover bottlenecks in existing optimization algorithms and necessitate further…

Mathematical Software · Computer Science 2024-10-18 Anugrah Jo Joshy , John T. Hwang

In this paper, we introduce a new algorithm based on archetypal analysis for blind hyperspectral unmixing, assuming linear mixing of endmembers. Archetypal analysis is a natural formulation for this task. This method does not require the…

Image and Video Processing · Electrical Eng. & Systems 2022-09-27 Alexandre Zouaoui , Gedeon Muhawenayo , Behnood Rasti , Jocelyn Chanussot , Julien Mairal

The generative AI technology offers an increasing variety of tools for generating entirely synthetic images that are increasingly indistinguishable from real ones. Unlike methods that alter portions of an image, the creation of completely…

Computer Vision and Pattern Recognition · Computer Science 2024-04-30 Manos Schinas , Symeon Papadopoulos