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Kidney stone disease results in millions of annual visits to emergency departments in the United States. Computed tomography (CT) scans serve as the standard imaging modality for efficient detection of kidney stones. Various approaches…

Image and Video Processing · Electrical Eng. & Systems 2024-08-02 Fangyijie Wang , Guenole Silvestre , Kathleen M. Curran

Wireless Capsule Endoscopy(WCE) has been widely used for the screening of gastrointestinal(GI) diseases, especially the small intestine, due to its advantages of non-invasive and painless imaging of the entire digestive tract.However, the…

Image and Video Processing · Electrical Eng. & Systems 2022-04-05 Zhuo Falin , Liu Haihua , Pan Ning

This paper describes a micro fluorescence in situ hybridization ({\mu}FISH)-based rapid detection of cytogenetic biomarkers on formalin-fixed paraffin embedded (FFPE) tissue sections. We demonstrated this method in the context of detecting…

Tissues and Organs · Quantitative Biology 2018-06-19 Deborah Huber , Govind V. Kaigala

Fish products account for about 16 percent of the human diet worldwide, as of 2017. The counting action is a significant component in growing and producing these products. Growers must count the fish accurately, to do so technological…

Computer Vision and Pattern Recognition · Computer Science 2022-09-14 Chen Rothschild

Tuberculosis (TB), caused by Mycobacterium tuberculosis, remains a critical global health issue, necessitating timely diagnosis and treatment. Current methods for detecting tuberculosis bacilli from bright field microscopic sputum smear…

Image and Video Processing · Electrical Eng. & Systems 2025-01-08 Greeshma K , Vishnukumar S

We examine the use of time series data, derived from Electric Cell-substrate Impedance Sensing (ECIS), to differentiate between standard mammalian cell cultures and those infected with a mycoplasma organism. With the goal of interpretable…

Quantitative Methods · Quantitative Biology 2022-02-23 Laura L. Tupper , Charles R. Keese , David S. Matteson

Deep learning based models have had great success in object detection, but the state of the art models have not yet been widely applied to biological image data. We apply for the first time an object detection model previously used on…

Bearing fault diagnosis in rotating machinery is critical for ensuring operational reliability, therefore early fault detection is essential to avoid catastrophic failures and expensive emergency repairs. Traditional methods like Fast…

Signal Processing · Electrical Eng. & Systems 2025-09-23 Dilshara Herath , Chinthaka Abeyrathne , Chamindu Adithya , Chathura Seneviratne

Transformers are very powerful tools for a variety of tasks across domains, from text generation to image captioning. However, transformers require substantial amounts of training data, which is often a challenge in biomedical settings,…

Computer Vision and Pattern Recognition · Computer Science 2023-07-04 Andrew Kean Gao

This study explores the fusion of a field-effect transistor (FET), a paper-based analytical cartridge, and the computational power of deep learning (DL) for quantitative biosensing via kinetic analyses. The FET sensors address the low…

Objective: Interventional devices, catheters and insertable imaging devices such as transesophageal echo (TOE) probes are routinely used in minimally invasive cardiovascular procedures. Detecting their positions and orientations in X-ray…

Image and Video Processing · Electrical Eng. & Systems 2025-03-11 YingLiang Ma , Sandra Howell , Aldo Rinaldi , Tarv Dhanjal , Kawal S. Rhode

Under the impact of global climate changes and human activities, harmful algae blooms in surface waters have become a growing concern due to negative impacts on water related industries. Therefore, reliable and cost effective methods of…

Computer Vision and Pattern Recognition · Computer Science 2018-10-26 Jason L. Deglint , Chao Jin , Alexander Wong

Airborne contaminants, e.g., bacterial spores, are usually analyzed by time consuming microscopic, chemical and biological assays. Current research into real time laser spectroscopic detectors of such contaminants is based on e.g. resonant…

Microorganisms such as bacteria and fungi play essential roles in many application fields, like biotechnique, medical technique and industrial domain. Microorganism counting techniques are crucial in microorganism analysis, helping…

Image and Video Processing · Electrical Eng. & Systems 2021-09-30 Jiawei Zhang , Chen Li , Md Mamunur Rahaman , Yudong Yao , Pingli Ma , Jinghua Zhang , Xin Zhao , Tao Jiang , Marcin Grzegorzek

The results of applying a laser dynamic speckle technique to characterize bacterial activity are presented. The speckle activity was detected in two-compartment Petri dishes. One compartment was inoculated and the other one was left as a…

Traditional diagnostic methods like colonoscopy are invasive yet critical tools necessary for accurately diagnosing colorectal cancer (CRC). Detection of CRC at early stages is crucial for increasing patient survival rates. However,…

Computer Vision and Pattern Recognition · Computer Science 2025-06-02 Xinliu Zhong , Leo Hwa Liang , Angela S. Koh , Yeo Si Yong

Differentiating between Intestinal Tuberculosis (ITB) and Crohn's Disease (CD) poses a significant clinical challenge due to their similar symptoms, clinical presentations, and imaging features. This study leverages Computed Tomography…

Image and Video Processing · Electrical Eng. & Systems 2024-10-25 Shashwat Gupta , L. Gokulnath , Akshan Aggarwal , Mahim Naz , Rajnikanth Yadav , Priyanka Bagade

Background and objective: Cell-level pathological image analysis requires working with extremely small image patches (40x40 pixels), far below standard ImageNet resolutions. It remains unclear whether modern deep learning architectures and…

Computer Vision and Pattern Recognition · Computer Science 2026-03-05 Hiroki Kagiyama , Toru Nagasaka , Yukari Adachi , Takaaki Tachibana , Ryota Ito , Mitsugu Fujita , Kimihiro Yamashita , Yoshihiro Kakeji

The rapid evolution of deepfake generation technologies poses critical challenges for detection systems, as non-continual learning methods demand frequent and expensive retraining. We reframe deepfake detection (DFD) as a Continual Learning…

Machine Learning · Computer Science 2025-09-11 Federico Fontana , Anxhelo Diko , Romeo Lanzino , Marco Raoul Marini , Bachir Kaddar , Gian Luca Foresti , Luigi Cinque

Cell-free DNA (cfDNA) analysis is a powerful, minimally invasive tool for monitoring disease progression, treatment response, and early detection. A major challenge, however, is accurately determining the tissue of origin, especially in…

Genomics · Quantitative Biology 2025-06-03 Keng-Jung Lee , Dharanya Sampath , Konstantinos Mavrommatis