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Interactions between biomolecules, electrons and protons are essential to many fundamental processes sustaining life. It is therefore of interest to build mathematical models of these bioelectrical processes not only to enhance…

Molecular Networks · Quantitative Biology 2020-12-08 Peter J. Gawthrop , Michael Pan

Lecture notes used as part of a graduate-level Introduction to Solid State Physics course at Cornell University. I attempt to unify and update the discussion of magnetism and superconductivity relative to standard textbook treatments, and…

Other Condensed Matter · Physics 2024-08-22 Daniel C. Ralph

The organization of live cells into tissues and their subsequent biological function involves inter-cell mechanical interactions, which are mediated by their elastic environment. To model this interaction, we consider cells as spherical…

Soft Condensed Matter · Physics 2024-02-20 Roman Golkov , Yair Shokef

Periodic configurations of electrodes, in particular of microelectrodes, have been of interest since the advent of microfabrication. In this report, theory which is common to any periodic cell (or any cell that can be extended periodically)…

Chemical Physics · Physics 2018-02-13 Cristian F. Guajardo Yévenes , Werasak Surareungchai

The basics of focused transport as applied to solar energetic particles are reviewed, paying special attention to areas of common misconception. The micro-physics of charged particles interacting with slab turbulence are investigated to…

Space Physics · Physics 2020-12-15 J. P. van den Berg , R. D. Strauss , F. Effenberger

In this paper we describe a couple of exercises that we developed for our online first-year EM course. The labs that we describe are focused on basic concepts from circuit analysis, namely Ohm's law and charging a capacitor with a constant…

Physics Education · Physics 2020-12-01 J. S. Bobowski

In this article, a novel implementation of a widely used pseudo-two-dimensional (P2D) model for lithium-ion battery simulation is presented with a transmission line circuit structure. This implementation represents an interplay between…

Chemical Physics · Physics 2021-11-03 Zeyang Geng , Siyang Wang , Matthew J. Lacey , Daniel Brandell , Torbjörn Thiringer

In this work we extend our previously developed formalism of Newtonian multi-fluid hydrodynamics to allow for coupling between the fluids and the electromagnetic and gravitational field. This is achieved within the convective variational…

Fluid Dynamics · Physics 2009-11-11 Reinhard Prix

Contrary to existing theoretical models, experimental evidence points out that electroporation (membrane defect formation under external electric fields) starts to occur within the range of transmembrane voltages that cells may routinely…

Biological Physics · Physics 2007-05-23 Zlatko Vasilkoski

In the limit of small concentrations and weak applied electric fields, the dielectric permittivity of suspensions of arbitrarily shaped, shelled and charged particles is calculated. It is proved that the dielectric behavior at low…

Biological Physics · Physics 2009-10-31 C. Prodan , E. Prodan

Lecture Goals: (i) Introduction to the basic concepts, meaning that the emphasis is, in the first instance, on the single-particle aspects. (ii) Service for Experimental Solid State Physics. (iii) Emphasis on the explanation of concepts and…

Strongly Correlated Electrons · Physics 2021-01-07 Frank Göhmann

Biological organisms are composed of numerous interconnected biochemical processes. Diseases occur when normal functionality of these processes is disrupted. Thus, understanding these biochemical processes and their interrelationships is a…

Artificial Intelligence · Computer Science 2014-03-04 Saadat Anwar

If students are to successfully grapple with authentic, complex biological problems as scientists and citizens, they need practice solving such problems during their undergraduate years. Physics education researchers have investigated…

Physics Education · Physics 2013-02-26 Anne-Marie Hoskinson , Marcos D. Caballero , Jennifer K. Knight

This work explores the use of joint density-functional theory, a new form of density-functional theory for the ab initio description of electronic systems in thermodynamic equilibrium with a liquid environment, to describe electrochemical…

Materials Science · Physics 2015-06-05 Kendra Letchworth-Weaver , T. A. Arias

We reformulate and extend porous electrode theory for non-ideal active materials, including those capable of phase transformations. Using principles of non-equilibrium thermodynamics, we relate the cell voltage, ionic fluxes, and Faradaic…

Chemical Physics · Physics 2012-08-24 Todd R. Ferguson , Martin Z. Bazant

We suggest that the propagation of the action potential is driven by a pressure pulse propagating in the axoplasm along the axon length. The pressure pulse mechanically activates Na ion channels embedded in the axon membrane. This…

Biological Physics · Physics 2009-05-15 Marat M. Rvachev

A thermodynamically consistent phase-field model is introduced for simulating multicellular deformation, and aggregation under flow conditions. In particular, a Lennard-Jones type potential is proposed under the phase-field framework for…

Numerical Analysis · Mathematics 2022-05-17 Lingyue Shen , Ping Lin , Zhiliang Xu , Shixin Xu

A thoughtless treatment of Maxwell's equations can lead to the interpretation of the existence of a causal relationship between their different terms and, therefore, that an electric field that varies in time generates a magnetic one and…

Physics Education · Physics 2025-01-14 Alvaro Suarez , Arturo C. Marti , Kristina Zuza , Jenaro Guisasola

We prove the existence and the uniqueness of a solution for a modified bidomain model, describing the electrical behaviour of the cardiac tissue in pathological situations. The leading idea is to reduce the problem to an abstract parabolic…

Analysis of PDEs · Mathematics 2021-01-26 Micol Amar , Daniele Andreucci , Claudia Timofte

Electric-field-driven electrolyte transport through nanoporous membranes is important for applications including osmotic power generation, sensing and iontronics. We derive an analytical equation in the Debye--H\"uckel regime and a…

Soft Condensed Matter · Physics 2026-05-01 Holly C. M. Baldock , David M. Huang