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For several decades now, Bayesian inference techniques have been applied to theories of particle physics, cosmology and astrophysics to obtain the probability density functions of their free parameters. In this study, we review and compare…

High Energy Physics - Phenomenology · Physics 2025-09-03 Joshua Albert , Csaba Balazs , Andrew Fowlie , Will Handley , Nicholas Hunt-Smith , Roberto Ruiz de Austri , Martin White

We present a new method, Non-Stationary Forward Flux Sampling, that allows efficient simulation of rare events in both stationary and non-stationary stochastic systems. The method uses stochastic branching and pruning to achieve uniform…

Molecular Networks · Quantitative Biology 2015-06-03 Nils B. Becker , Rosalind J. Allen , Pieter Rein ten Wolde

We develop sampling algorithms to fit Bayesian hierarchical models, the computational complexity of which scales linearly with the number of observations and the number of parameters in the model. We focus on crossed random effect and…

Computation · Statistics 2025-01-03 Omiros Papaspiliopoulos , Timothée Stumpf-Fétizon , Giacomo Zanella

The current and upcoming generation of Very Large Volume Neutrino Telescopes---collecting unprecedented quantities of neutrino events---can be used to explore subtle effects in oscillation physics, such as (but not restricted to) the…

Data Analysis, Statistics and Probability · Physics 2019-12-05 IceCube Collaboration , M. G. Aartsen , M. Ackermann , J. Adams , J. A. Aguilar , M. Ahlers , M. Ahrens , I. Al Samarai , D. Altmann , K. Andeen , T. Anderson , I. Ansseau , G. Anton , C. Argüelles , T. C. Arlen , J. Auffenberg , S. Axani , H. Bagherpour , X. Bai , A. Balagopal V. , J. P. Barron , I. Bartos , S. W. Barwick , V. Baum , R. Bay , J. J. Beatty , J. Becker Tjus , K. -H. Becker , S. BenZvi , D. Berley , E. Bernardini , D. Z. Besson , G. Binder , D. Bindig , E. Blaufuss , S. Blot , C. Bohm , M. Bohmer , M. Börner , F. Bos , S. Böser , O. Botner , E. Bourbeau , J. Bourbeau , F. Bradascio , J. Braun , M. Brenzke , H. -P. Bretz , S. Bron , J. Brostean-Kaiser , A. Burgman , R. S. Busse , T. Carver , E. Cheung , D. Chirkin , A. Christov , K. Clark , L. Classen , G. H. Collin , J. M. Conrad , P. Coppin , P. Correa , D. F. Cowen , R. Cross , P. Dave , M. Day , J. P. A. M. de André , C. De Clercq , J. J. DeLaunay , H. Dembinski , S. De Ridder , P. Desiati , K. D. de Vries , G. de Wasseige , M. de With , T. DeYoung , J. C. Díaz-Vélez , V. di Lorenzo , H. Dujmovic , J. P. Dumm , M. Dunkman , M. A. DuVernois , E. Dvorak , B. Eberhardt , T. Ehrhardt , B. Eichmann , P. Eller , R. Engel , J. J. Evans , P. A. Evenson , S. Fahey , A. R. Fazely , J. Felde , K. Filimonov , C. Finley , S. Flis , A. Franckowiak , E. Friedman , A. Fritz , T. K. Gaisser , J. Gallagher , A. Gartner , L. Gerhardt , R. Gernhaeuser , K. Ghorbani , W. Giang , T. Glauch , T. Glüsenkamp , A. Goldschmidt , J. G. Gonzalez , D. Grant , Z. Griffith , C. Haack , A. Hallgren , F. Halzen , K. Hanson , J. Haugen , A. Haungs , D. Hebecker , D. Heereman , K. Helbing , R. Hellauer , F. Henningsen , S. Hickford , J. Hignight , G. C. Hill , K. D. Hoffman , B. Hoffmann , R. Hoffmann , T. Hoinka , B. Hokanson-Fasig , K. Holzapfel , K. Hoshina , F. Huang , M. Huber , T. Huber , T. Huege , K. Hultqvist , M. Hünnefeld , R. Hussain , S. In , N. Iovine , A. Ishihara , E. Jacobi , G. S. Japaridze , M. Jeong , K. Jero , B. J. P. Jones , P. Kalaczynski , O. Kalekin , W. Kang , D. Kang , A. Kappes , D. Kappesser , T. Karg , A. Karle , T. Katori , U. Katz , M. Kauer , A. Keivani , J. L. Kelley , A. Kheirandish , J. Kim , M. Kim , T. Kintscher , J. Kiryluk , T. Kittler , S. R. Klein , R. Koirala , H. Kolanoski , L. Köpke , C. Kopper , S. Kopper , J. P. Koschinsky , D. J. Koskinen , M. Kowalski , C. B. Krauss , K. Krings , M. Kroll , G. Krückl , S. Kunwar , N. Kurahashi , T. Kuwabara , A. Kyriacou , M. Labare , J. L. Lanfranchi , M. J. Larson , F. Lauber , D. Lennarz , K. Leonard , M. Lesiak-Bzdak , A. Leszczynska , M. Leuermann , Q. R. Liu , E. Lohfink , J. LoSecco , C. J. Lozano Mariscal , L. Lu , J. Lünemann , W. Luszczak , J. Madsen , G. Maggi , K. B. M. Mahn , S. Mancina , S. Mandalia , S. Marka , Z. Marka , R. Maruyama , K. Mase , R. Maunu , K. Meagher , M. Medici , M. Meier , T. Menne , G. Merino , T. Meures , S. Miarecki , J. Micallef , G. Momenté , T. Montaruli , R. W. Moore , M. Moulai , R. Nahnhauer , P. Nakarmi , U. Naumann , G. Neer , H. Niederhausen , S. C. Nowicki , D. R. Nygren , A. Obertacke Pollmann , M. Oehler , A. Olivas , A. O'Murchadha , E. O'Sullivan , A. Palazzo , T. Palczewski , H. Pandya , D. V. Pankova , L. Papp , P. Peiffer , J. A. Pepper , C. Pérez de los Heros , T. C. Petersen , D. Pieloth , E. Pinat , J. L. Pinfold , M. Plum , P. B. Price , G. T. Przybylski , C. Raab , L. Rädel , M. Rameez , L. Rauch , K. Rawlins , I. C. Rea , R. Reimann , B. Relethford , M. Relich , M. Renschler , E. Resconi , W. Rhode , M. Richman , M. Riegel , S. Robertson , M. Rongen , C. Rott , T. Ruhe , D. Ryckbosch , D. Rysewyk , I. Safa , T. Sälzer , S. E. Sanchez Herrera , A. Sandrock , J. Sandroos , P. Sandstrom , M. Santander , S. Sarkar , S. Sarkar , K. Satalecka , H. Schieler , P. Schlunder , T. Schmidt , A. Schneider , S. Schoenen , S. Schöneberg , F. G. Schröder , L. Schumacher , S. Sclafani , D. Seckel , S. Seunarine , M. H. Shaevitz , J. Soedingrekso , D. Soldin , S. Söldner-Rembold , M. Song , G. M. Spiczak , C. Spiering , J. Stachurska , M. Stamatikos , T. Stanev , A. Stasik , R. Stein , J. Stettner , A. Steuer , T. Stezelberger , R. G. Stokstad , A. Stößl , N. L. Strotjohann , T. Stuttard , G. W. Sullivan , M. Sutherland , I. Taboada , A. Taketa , H. K. M. Tanaka , J. Tatar , F. Tenholt , S. Ter-Antonyan , A. Terliuk , S. Tilav , P. A. Toale , M. N. Tobin , C. Tönnis , S. Toscano , D. Tosi , M. Tselengidou , C. F. Tung , A. Turcati , C. F. Turley , B. Ty , E. Unger , M. Usner , J. Vandenbroucke , W. Van Driessche , D. van Eijk , N. van Eijndhoven , S. Vanheule , J. van Santen , D. Veberic , E. Vogel , M. Vraeghe , C. Walck , A. Wallace , M. Wallraff , F. D. Wandler , N. Wandkowsky , A. Waza , C. Weaver , A. Weindl , M. J. Weiss , C. Wendt , J. Werthebach , S. Westerhoff , B. J. Whelan , K. Wiebe , C. H. Wiebusch , L. Wille , D. R. Williams , L. Wills , M. Wolf , J. Wood , T. R. Wood , E. Woolsey , K. Woschnagg , G. Wrede , S. Wren , D. L. Xu , X. W. Xu , Y. Xu , J. P. Yanez , G. Yodh , S. Yoshida , T. Yuan

Nested sampling (NS) is a popular algorithm for Bayesian computation. We investigate statistical errors in NS both analytically and numerically. We show two analytic results. First, we show that the leading terms in Skilling's expression…

Instrumentation and Methods for Astrophysics · Physics 2023-03-29 Andrew Fowlie , Qiao Li , Huifang Lv , Yecheng Sun , Jia Zhang , Le Zheng

There is an ever-growing need in the gravitational wave community for fast and reliable inference methods, accompanied by an informative error bar. Nested sampling satisfies the last two requirements, but its computational cost can become…

Instrumentation and Methods for Astrophysics · Physics 2025-11-05 Metha Prathaban , Harry Bevins , Will Handley

We analyze a batched variant of Stochastic Gradient Descent (SGD) with weighted sampling distribution for smooth and non-smooth objective functions. We show that by distributing the batches computationally, a significant speedup in the…

Numerical Analysis · Mathematics 2017-03-02 Deanna Needell , Rachel Ward

Nested error regression models are useful tools for analysis of grouped data, especially in the case of small area estimation. This paper suggests a nested error regression model using uncertain random effects in which the random effect in…

Methodology · Statistics 2017-02-28 Shonosuke Sugasawa , Tatsuya Kubokawa

In probabilistic (Bayesian) inferences, we typically want to compute properties of the posterior distribution, describing knowledge of unknown quantities in the context of a particular dataset and the assumed prior information. The marginal…

Computation · Statistics 2016-11-03 Brendon J. Brewer , Daniel Foreman-Mackey

Bayesian model selection provides the cosmologist with an exacting tool to distinguish between competing models based purely on the data, via the Bayesian evidence. Previous methods to calculate this quantity either lacked general…

Astrophysics · Physics 2008-11-26 J. R. Shaw , M. Bridges , M. P. Hobson

Nested simulation is a natural approach to tackle nested estimation problems in operations research and financial engineering. The outer-level simulation generates outer scenarios and the inner-level simulations are run in each outer…

Risk Management · Quantitative Finance 2022-03-31 Kun Zhang , Ben Mingbin Feng , Guangwu Liu , Shiyu Wang

This article aims to explain the Nested Benders algorithm for the solution of large-scale stochastic programming problems in a way that is intelligible to someone coming to it for the first time. In doing so it gives an explanation of…

Optimization and Control · Mathematics 2013-12-13 James Murphy

Nested sampling has emerged as a valuable tool for Bayesian analysis, in particular for determining the Bayesian evidence. The method is based on a specific type of random sampling of the likelihood function and prior volume of the…

Instrumentation and Methods for Astrophysics · Physics 2015-05-27 Charles R. Keeton

The abundance of new cosmological data becoming available means that a wider range of cosmological models are testable than ever before. However, an important distinction must be made between parameter fitting and model selection. While…

Astrophysics · Physics 2009-11-13 Pia Mukherjee , David Parkinson , Andrew R. Liddle

Gradient flow in the 2-Wasserstein space is widely used to optimize functionals over probability distributions and is typically implemented using an interacting particle system with $n$ particles. Analyzing these algorithms requires showing…

Machine Learning · Computer Science 2026-03-27 Chandan Tankala , Dheeraj M. Nagaraj , Anant Raj

We present nested sampling for factor graphs (NSFG), a novel nested sampling approach to approximate inference for posterior distributions expressed over factor-graphs. Performing such inference is a key step in simultaneous localization…

Robotics · Computer Science 2022-08-10 Qiangqiang Huang , Alan Papalia , John J. Leonard

We develop Bayesian predictive stacking for geostatistical models, where the primary inferential objective is to provide inference on the latent spatial random field and conduct spatial predictions at arbitrary locations. We exploit…

Methodology · Statistics 2025-09-25 Lu Zhang , Wenpin Tang , Sudipto Banerjee

The nested sampling algorithm has been shown to be a general method for calculating the pressure-temperature-composition phase diagrams of materials. While the previous implementation used single-particle Monte Carlo moves, these are…

Statistical Mechanics · Physics 2017-11-17 Robert J. N. Baldock , Noam Bernstein , K. Michael Salerno , Lívia B. Pártay , Gábor Csányi

Sampling errors in nested sampling parameter estimation differ from those in Bayesian evidence calculation, but have been little studied in the literature. This paper provides the first explanation of the two main sources of sampling errors…

Methodology · Statistics 2018-12-11 Edward Higson , Will Handley , Mike Hobson , Anthony Lasenby

The use of high-dimensional data for targeted therapeutic interventions requires new ways to characterize the heterogeneity observed across subgroups of a specific population. In particular, models for partially exchangeable data are needed…

Methodology · Statistics 2020-08-18 Francesco Denti , Federico Camerlenghi , Michele Guindani , Antonietta Mira