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Related papers: Parameterized Vietoris-Rips Filtrations via Covers

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Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

The compression of geometric structures is a relatively new field of data compression. Since about 1995, several articles have dealt with the coding of meshes, using for most of them the following approach: the vertices of the mesh are…

Computational Geometry · Computer Science 2007-05-23 Olivier Devillers , Pierre-Maris Gandoin

Persistent homology provides a new approach for the topological simplification of big data via measuring the life time of intrinsic topological features in a filtration process and has found its success in scientific and engineering…

Biomolecules · Quantitative Biology 2014-12-09 Bao Wang , Guo-Wei Wei

Computational topology provides a tool, persistent homology, to extract quantitative descriptors from structured objects (images, graphs, point clouds, etc). These descriptors can then be involved in optimization problems, typically as a…

Computational Geometry · Computer Science 2026-03-27 Mathieu Carriere , Yuichi Ike , Théo Lacombe , Naoki Nishikawa

We study the asymptotic nature of geometric structures formed from a point cloud of observations of (generally heavy tailed) distributions in a Euclidean space of dimension greater than one. A typical example is given by the Betti numbers…

Probability · Mathematics 2016-01-11 Takashi Owada , Robert J. Adler

Persistent homology is a tool of topological data analysis that has been used in a variety of settings to characterize different dimensional holes in data. However, persistent homology computations can be memory intensive with a…

Algebraic Topology · Mathematics 2024-10-04 Chenghui Li , Jessi Cisewski-Kehe

Persistent homology is a topological feature used in a variety of applications such as generating features for data analysis and penalizing optimization problems. We develop an approach to accelerate persistent homology computations…

Algebraic Topology · Mathematics 2023-01-19 Yuan Luo , Bradley J. Nelson

Given a finite set in a metric space, the topological analysis generalizes hierarchical clustering using a 1-parameter family of homology groups to quantify connectivity in all dimensions. The connectivity is compactly described by the…

Computational Geometry · Computer Science 2016-07-22 Herbert Edelsbrunner , Hubert Wagner

We present a new, inductive construction of the Vietoris-Rips complex, in which we take advantage of a small amount of unexploited combinatorial structure in the $k$-skeleton of the complex in order to avoid unnecessary comparisons when…

Combinatorics · Mathematics 2024-06-19 Antonio Rieser

We define a class of probability distributions that we call simplicial mixture models, inspired by simplicial complexes from algebraic topology. The parameters of these distributions represent their topology and we show that it is possible…

Statistics Theory · Mathematics 2019-09-24 James T. Griffin

Persistent homology is constrained to purely topological persistence while multiscale graphs account only for geometric information. This work introduces persistent spectral theory to create a unified low-dimensional multiscale paradigm for…

Combinatorics · Mathematics 2019-12-13 Rui Wang , Duc Duy Nguyen , Guo-Wei Wei

The subject of persistent homology has vitalized applications of algebraic topology to point cloud data and to application fields far outside the realm of pure mathematics. The area has seen several fundamentally important results that are…

Algebraic Topology · Mathematics 2013-11-12 Mikael Vejdemo-Johansson

Using digital topology approach, we construct digital models of closed surfaces as the intersection graphs of LCL covers of the surfaces. It is proved that digital models of closed surfaces are digital 2-dimensional surfaces preserving the…

Computational Geometry · Computer Science 2014-12-02 Alexander V. Evako

An abundance of real-world problems manifest as covering edges and/or vertices of a graph with cliques that are optimized for some objectives. We consider different structural parameters of graph, and design fixed-parameter tractable…

Data Structures and Algorithms · Computer Science 2022-08-29 Ahammed Ullah

Fix a finite set of points in Euclidean $n$-space $\euc^n$, thought of as a point-cloud sampling of a certain domain $D\subset\euc^n$. The Rips complex is a combinatorial simplicial complex based on proximity of neighbors that serves as an…

Geometric Topology · Mathematics 2007-12-05 Erin W. Chambers , Vin de Silva , Jeff Erickson , Robert Ghrist

Supervised machine learning pipelines trained on features derived from persistent homology have been experimentally observed to ignore much of the information contained in a persistence diagram. Computing persistence diagrams is often the…

Machine Learning · Statistics 2025-07-11 Nicole Abreu , Parker B. Edwards , Francis Motta

In healthcare, accurately classifying medical images is vital, but conventional methods often hinge on medical data with a consistent grid structure, which may restrict their overall performance. Recent medical research has been focused on…

Computer Vision and Pattern Recognition · Computer Science 2023-06-06 Kishore Babu Nampalle , Pradeep Singh , Vivek Narayan Uppala , Sumit Gangwar , Rajesh Singh Negi , Balasubramanian Raman

We propose an approach to learning with graph-structured data in the problem domain of graph classification. In particular, we present a novel type of readout operation to aggregate node features into a graph-level representation. To this…

Machine Learning · Computer Science 2021-05-18 Christoph D. Hofer , Florian Graf , Bastian Rieck , Marc Niethammer , Roland Kwitt

Persistent homology is a fundamental tool in Topological Data Analysis. The associated algebraic structure is the persistence module, a sequence of vector spaces connected by linear maps. Persistence modules admit a complete and…

Algebraic Topology · Mathematics 2026-02-13 R. Gonzalez-Diaz , M. Soriano-Trigueros , A. Torras-Casas

Forman-Ricci curvature (FRC) is a potent and powerful tool for analysing empirical networks, as the distribution of the curvature values can identify structural information that is not readily detected by other geometrical methods.…

Data Analysis, Statistics and Probability · Physics 2024-05-13 Danillo Barros de Souza , Jonatas T. S. da Cunha , Fernando A. N. Santos , Jürgen Jost , Serafim Rodrigues
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