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In the shotgun assembly problem for a graph, we are given the empirical profile for rooted neighborhoods of depth $r$ (up to isomorphism) for some $r\geq 1$ and we wish to recover the underlying graph up to isomorphism. When the underlying…

Probability · Mathematics 2022-09-13 Jian Ding , Yiyang Jiang , Heng Ma

Mossel and Ross (2019) introduce the shotgun assembly problem for random graphs: what radius $R$ ensures that the random graph $G$ can be uniquely recovered from its list of rooted $R$-neighborhoods, with high probability? Here we consider…

Probability · Mathematics 2025-12-03 Brice Huang , Elchanan Mossel , Nike Sun , Claire Zhang , Leqi Zhou

In the graph shotgun assembly problem, we are given the balls of radius $r$ around each vertex of a graph and asked to reconstruct the graph. We study the shotgun assembly of the Erd\H{o}s-R\'enyi random graph $\mathcal G(n,p)$ for a wide…

Combinatorics · Mathematics 2025-06-24 Tom Johnston , Gal Kronenberg , Alexander Roberts , Alex Scott

We consider the problem of reconstructing graphs or labeled graphs from neighborhoods of a given radius r. Special instances of this problem include the well known: DNA shotgun assembly; the lesser-known: neural network reconstruction; and…

Probability · Mathematics 2022-08-19 Elchanan Mossel , Nathan Ross

In a recent work, Mossel and Ross considered the shotgun assembly problem for a random jigsaw puzzle. Their model consists of a puzzle - an $n\times n$ grid, where each vertex is viewed as a center of a piece. They assume that each of the…

Combinatorics · Mathematics 2016-05-11 Charles Bordenave , Uriel Feige , Elchanan Mossel

Graph shotgun assembly refers to the problem of reconstructing a graph from a collection of local neighborhoods. In this paper, we consider shotgun assembly of \ER random graphs $G(n, p_n)$, where $p_n = n^{-\alpha}$ for $0 < \alpha < 1$.…

Probability · Mathematics 2022-01-14 Julia Gaudio , Elchanan Mossel

We present a framework for the design of optimal assembly algorithms for shotgun sequencing under the criterion of complete reconstruction. We derive a lower bound on the read length and the coverage depth required for reconstruction in…

Genomics · Quantitative Biology 2013-02-20 Guy Bresler , Ma'ayan Bresler , David Tse

In this paper, we propose a family of label recovery problems on weighted Euclidean random graphs. The vertices of a graph are embedded in $\mathbb{R}^d$ according to a Poisson point process, and are assigned to a discrete community label.…

Social and Information Networks · Computer Science 2025-01-15 Julia Gaudio , Charlie Guan , Xiaochun Niu , Ermin Wei

Reliable uncertainty estimation is crucial for robust object detection in autonomous driving. However, previous works on probabilistic object detection either learn predictive probability for bounding box regression in an un-supervised…

Computer Vision and Pattern Recognition · Computer Science 2020-08-11 Di Feng , Lars Rosenbaum , Fabian Timm , Klaus Dietmayer

Given a positive integer $n$, an unlabeled graph $G$ on $n$ vertices, and a vertex $v$ of $G$, let $N_G(v)$ be the subgraph of $G$ induced by vertices of $G$ of distance at most one from $v$. We show that there are universal constants…

Probability · Mathematics 2023-08-28 Han Huang , Konstantin Tikhomirov

In a recent paper [6], J. Gaudio and E. Mossel studied the shotgun assembly of the Erd\H{o}s-R\'enyi graph $\mathcal G(n,p_n)$ with $p_n=n^{-\alpha}$, and showed that the graph is reconstructable form its $1$-neighbourhoods if $0<\alpha <…

Combinatorics · Mathematics 2022-09-23 Kartick Adhikari , Sukrit Chakraborty

The labeled stochastic block model is a random graph model representing networks with community structure and interactions of multiple types. In its simplest form, it consists of two communities of approximately equal size, and the edges…

Machine Learning · Statistics 2015-02-12 Marc Lelarge , Laurent Massoulié , Jiaming Xu

The error or variability of machine learning algorithms is often assessed by repeatedly re-fitting a model with different weighted versions of the observed data. The ubiquitous tools of cross-validation (CV) and the bootstrap are examples…

Methodology · Statistics 2020-02-10 Ryan Giordano , Will Stephenson , Runjing Liu , Michael I. Jordan , Tamara Broderick

In this paper, we study the 3D strip packing problem in which we are given a list of 3-dimensional boxes and required to pack all of them into a 3-dimensional strip with length 1 and width 1 and unlimited height to minimize the height used.…

Data Structures and Algorithms · Computer Science 2007-05-23 Xin Han , Kazuo Iwama , Guochuan Zhang

The support recovery problem consists of determining a sparse subset of a set of variables that is relevant in generating a set of observations, and arises in a diverse range of settings such as compressive sensing, and subset selection in…

Information Theory · Computer Science 2016-08-31 Jonathan Scarlett , Volkan Cevher

The stochastic block model (SBM) is a random graph model in which the edges are generated according to the underlying cluster structure on the vertices. The (ferromagnetic) Ising model, on the other hand, assigns $\pm 1$ labels to vertices…

Probability · Mathematics 2020-10-15 Min Ye

We discuss the universality of the L1 recovery threshold in compressed sensing. Previous studies in the fields of statistical mechanics and random matrix integration have shown that L1 recovery under a random matrix with orthogonal symmetry…

Information Theory · Computer Science 2013-05-17 Koujin Takeda , Yoshiyuki Kabashima

Various applications involve assigning discrete label values to a collection of objects based on some pairwise noisy data. Due to the discrete---and hence nonconvex---structure of the problem, computing the optimal assignment (e.g.~maximum…

Information Theory · Computer Science 2017-12-11 Yuxin Chen , Emmanuel Candes

A sharp-threshold theorem is proved for box-crossing probabilities on the square lattice. The models in question are the random-cluster model near the self-dual point $p_{\mathrm {sd}}(q)=\sqrt{q}/(1+\sqrt{q})$, the Ising model with…

Probability · Mathematics 2011-01-06 Benjamin Graham , Geoffrey Grimmett

The problem of Distance Edge Labeling is a variant of Distance Vertex Labeling (also known as $L_{2,1}$ labeling) that has been studied for more than twenty years and has many applications, such as frequency assignment. The Distance Edge…

Discrete Mathematics · Computer Science 2022-03-17 Dušan Knop , Tomáš Masařík
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