Related papers: Tropical medians by transportation
This paper is about the combinatorics of finite point configurations in the tropical projective space or, dually, of arrangements of finitely many tropical hyperplanes. Moreover, arrangements of finitely many tropical halfspaces can be…
A metric phylogenetic tree relating a collection of taxa induces weighted rooted triples and weighted quartets for all subsets of three and four taxa, respectively. New intertaxon distances are defined that can be calculated from these…
We consider the question of when points in tropical affine space uniquely determine a tropical hypersurface. We introduce a notion of multiplicity of points so that this question may be meaningful even if some of the points coincide. We…
We consider multidimensional optimization problems, which are formulated and solved in terms of tropical mathematics. The problems are to minimize (maximize) a linear or nonlinear function defined on vectors over an idempotent semifield,…
We introduce an algorithm that samples a set of loop momenta distributed as a given Feynman integrand. The algorithm uses the tropical sampling method and can be applied to evaluate phase-space-type integrals efficiently. We provide an…
Let ${\mathcal D}^{k,l}(m,n)$ be the set of all the integer points in the transportation polytope of $kn\times ln$ matrices with row sums $lm$ and column sums $km$. In this paper we find the sharp lower bound on the tropical determinant…
Motivated by applications to low-rank matrix completion, we give a combinatorial characterization of the independent sets in the algebraic matroid associated to the collection of $m\times n$ rank-2 matrices and $n\times n$ skew-symmetric…
We study the behavior of phylogenetic tree shapes in the tropical geometric interpretation of tree space. Tree shapes are formally referred to as tree topologies; a tree topology can also be thought of as a tree combinatorial type, which is…
The tropical semiring is an algebraic system with addition ``$\max$'' and multiplication ``$+$''. As well as in conventional algebra, linear programming in the tropical semiring has been developed. In this study, we introduce a new type of…
We establish a new notion of tropical convexity for signed tropical numbers. We provide several equivalent descriptions involving balance relations and intersections of open halfspaces as well as the image of a union of polytopes over…
There are several interrelated notions of discrete curvature on graphs. Many approaches utilize the optimal transportation metric on its probability simplex or the distance matrix of the graph. In this survey article, we compute formulas…
In this paper we study the convergence of the max-consensus protocol. Tropical algebra is used to formulate the problem. Necessary and sufficient conditions for convergence of the max-consensus protocol over fixed as well as switching…
Understanding the evolution of a set of genes or species is a fundamental problem in evolutionary biology. The problem we study here takes as input a set of trees describing {possibly discordant} evolutionary scenarios for a given set of…
In this work we study the interleaving distance between merge trees from a combinatorial point of view. We use a particular type of matching between trees to obtain a novel formulation of the distance. With such formulation, we tackle the…
Many recent approximation algorithms for different variants of the traveling salesman problem (asymmetric TSP, graph TSP, s-t-path TSP) exploit the well-known fact that a solution of the natural linear programming relaxation can be written…
Finding a common factor of two multivariate polynomials with approximate coefficients is a problem in symbolic-numeric computing. Taking a tropical view on this problem leads to efficient preprocessing techniques, applying polyhedral…
Phylogenomics is a new field which applies to tools in phylogenetics to genome data. Due to a new technology and increasing amount of data, we face new challenges to analyze them over a space of phylogenetic trees. Because a space of…
We consider paths in weighted and directed temporal networks, introducing tools to compute sets of paths of high probability. We quantify the relative importance of the most probable path between two nodes with respect to the whole set of…
Tropical Geometry and Mathematical Morphology share the same max-plus and min-plus semiring arithmetic and matrix algebra. In this chapter we summarize some of their main ideas and common (geometric and algebraic) structure, generalize and…
We give an overview of recently implemented polymake features for computations in tropical geometry. The main focus is on explicit examples rather than technical explanations. Our computations employ tropical hypersurfaces, moduli of…