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A detection system, modeled in a graph, is composed of "detectors" positioned at a subset of vertices in order to uniquely locate an ``intruder" at any vertex. \emph{Identifying codes} use detectors that can sense the presence or absence of…

Combinatorics · Mathematics 2021-12-06 Devin C. Jean , Suk J. Seo

We propose two new outlier detection methods, for identifying and classifying different types of outliers in (big) functional data sets. The proposed methods are based on an existing method called Massive Unsupervised Outlier Detection…

Methodology · Statistics 2021-10-15 Oluwasegun Taiwo Ojo , Antonio Fernández Anta , Rosa E. Lillo , Carlo Sguera

Python libraries are widely used for machine learning and scientific computing tasks today. APIs in Python libraries are deprecated due to feature enhancements and bug fixes in the same way as in other languages. These deprecated APIs are…

Software Engineering · Computer Science 2021-05-11 Aparna Vadlamani , Rishitha Kalicheti , Sridhar Chimalakonda

Openly sharing data with sensitive attributes and privacy restrictions is a challenging task. In this document we present the implementation of pyCANON, a Python library and command line interface (CLI) to check and assess the level of…

Cryptography and Security · Computer Science 2023-05-15 Judith Sáinz-Pardo Díaz , Álvaro López García

We present python libraries for Feynman graphs manipulation. The key feature of these libraries is usage of generalization of graph representation offered by B. G. Nickel et al. In this approach graph is represented in some unique…

High Energy Physics - Phenomenology · Physics 2014-10-03 D. Batkovich , Yu. Kirienko , M. Kompaniets , S. Novikov

From social to biological systems, many real-world systems are characterized by higher-order, non-dyadic interactions. Such systems are conveniently described by hypergraphs, where hyperedges encode interactions among an arbitrary number of…

Graph neural networks (GNNs) are proven effective in extracting complex node and structural information from graph data. While current GNNs perform well in node classification tasks within in-distribution (ID) settings, real-world scenarios…

Machine Learning · Computer Science 2025-05-08 Tao Yin , Chen Zhao , Xiaoyan Liu , Minglai Shao

We propose HyGLAD, a novel algorithm that automatically builds a set of interpretable patterns that model event data. These patterns can then be used to detect event-based anomalies in a stationary system, where any deviation from past…

Software Engineering · Computer Science 2025-09-09 Margarida Ferreira , Victor Nicolet , Luan Pham , Joey Dodds , Daniel Kroening , Ines Lynce , Ruben Martins

PyG (PyTorch Geometric) has evolved significantly since its initial release, establishing itself as a leading framework for Graph Neural Networks. In this paper, we present Pyg 2.0 (and its subsequent minor versions), a comprehensive update…

This paper presents `chipfiring`, a comprehensive Python package for the mathematical analysis of chip-firing games on finite graphs. The package provides a robust toolkit for defining graphs and chip configurations (divisors), performing…

Combinatorics · Mathematics 2025-08-05 Dhyey Dharmendrakumar Mavani , Tairan Ji , Nathan Pflueger

Graph Neural Networks (GNNs) are state-of-the-art models for performing prediction tasks on graphs. While existing GNNs have shown great performance on various tasks related to graphs, little attention has been paid to the scenario where…

Machine Learning · Computer Science 2023-08-15 Yu Song , Donglin Wang

PySINDy is a Python package for the discovery of governing dynamical systems models from data. In particular, PySINDy provides tools for applying the sparse identification of nonlinear dynamics (SINDy) (Brunton et al. 2016) approach to…

Graph anomaly detection (GAD) has attracted increasing attention in recent years for identifying malicious samples in a wide range of graph-based applications, such as social media and e-commerce. However, most GAD methods assume identical…

Machine Learning · Computer Science 2025-09-09 Junjun Pan , Yu Zheng , Yue Tan , Yixin Liu

Anomaly detection is a crucial task in complex distributed systems. A thorough understanding of the requirements and challenges of anomaly detection is pivotal to the security of such systems, especially for real-world deployment. While…

The freud Python package is a powerful library for analyzing simulation data. Written with modern simulation and data analysis workflows in mind, freud provides a Python interface to fast, parallelized C++ routines that run efficiently on…

Anomaly detection aims to identify deviations from normal patterns within data. This task is particularly crucial in dynamic graphs, which are common in applications like social networks and cybersecurity, due to their evolving structures…

Machine Learning · Computer Science 2024-12-24 Xiao Yang , Xuejiao Zhao , Zhiqi Shen

Anomaly detection (AD) is essential in areas such as fraud detection, network monitoring, and scientific research. However, the diversity of data modalities and the increasing number of specialized AD libraries pose challenges for…

Computation and Language · Computer Science 2025-05-20 Tiankai Yang , Junjun Liu , Wingchun Siu , Jiahang Wang , Zhuangzhuang Qian , Chanjuan Song , Cheng Cheng , Xiyang Hu , Yue Zhao

As Graph Neural Networks (GNNs) become popular, libraries like PyTorch-Geometric (PyG) and Deep Graph Library (DGL) are proposed; these libraries have emerged as the de facto standard for implementing GNNs because they provide…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-02-29 Yi-Chien Lin , Yuyang Chen , Sameh Gobriel , Nilesh Jain , Gopi Krishna Jha , Viktor Prasanna

Linear operators and optimisation are at the core of many algorithms used in signal and image processing, remote sensing, and inverse problems. For small to medium-scale problems, existing software packages (e.g., MATLAB, Python numpy and…

Mathematical Software · Computer Science 2019-07-30 Matteo Ravasi , Ivan Vasconcelos

Python is one of the most popular programming languages; as such, projects written in Python involve an increasing number of diverse security vulnerabilities. However, existing state-of-the-art analysis tools for Python only support a few…

Software Engineering · Computer Science 2026-01-22 Yoann Marquer , Domenico Bianculli , Lionel C. Briand