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Stencils represent a class of computational patterns where an output grid point depends on a fixed shape of neighboring points in an input grid. Stencil computations are prevalent in scientific applications engaging a significant portion of…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-24 Jesmin Jahan Tithi , Fabrizio Petrini , Hongbo Rong , Andrei Valentin , Carl Ebeling

GPUs offer orders-of-magnitude higher memory bandwidth than traditional CPU-only systems. However, GPU device memory tends to be relatively small and the memory capacity can not be increased by the user. This paper describes Buddy…

Hardware Architecture · Computer Science 2019-04-17 Esha Choukse , Michael Sullivan , Mike O'Connor , Mattan Erez , Jeff Pool , David Nellans , Steve Keckler

This work presents a GPU thread mapping approach that allows doing fast parallel stencil-like computations on discrete fractals using their compact representation. The intuition behind is to employ two GPU tensor-core accelerated thread…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-10-26 Felipe A. Quezada , Cristóbal A. Navarro

Automatic code generation is frequently used to create implementations of algorithms specifically tuned to particular hardware and application parameters. The code generation process involves the selection of adequate code transformations,…

Performance · Computer Science 2024-08-08 Dominik Ernst , Georg Hager , Markus Holzer , Matthias Knorr , Gerhard Wellein

We advocate the Loop-of-stencil-reduce pattern as a means of simplifying the implementation of data-parallel programs on heterogeneous multi-core platforms. Loop-of-stencil-reduce is general enough to subsume map, reduce, map-reduce,…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-09-16 M. Aldinucci , M. Danelutto , M. Drocco , P. Kilpatrick , C. Misale , G. Peretti Pezzi , M. Torquati

Bandwidth-starved multicore chips have become ubiquitous. It is well known that the performance of stencil codes can be improved by temporal blocking, lessening the pressure on the memory interface. We introduce a new pipelined approach…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-06-17 Markus Wittmann , Georg Hager , Jan Treibig , Gerhard Wellein

Large-scale simulations of time-dependent problems generate a massive amount of data and with the explosive increase in computational resources the size of the data generated by these simulations has increased significantly. This has…

Computational Engineering, Finance, and Science · Computer Science 2022-01-19 Shaghayegh Zamani Ashtiani , Mujeeb R. Malik , Hessam Babaee

The performance of CPU-based and GPU-based systems is often low for PDE codes, where large, sparse, and often structured systems of linear equations must be solved. Iterative solvers are limited by data movement, both between caches and…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-09 Kamil Rocki , Dirk Van Essendelft , Ilya Sharapov , Robert Schreiber , Michael Morrison , Vladimir Kibardin , Andrey Portnoy , Jean Francois Dietiker , Madhava Syamlal , Michael James

Stencil computations lie at the heart of many scientific and industrial applications. Unfortunately, stencil algorithms perform poorly on machines with cache based memory hierarchy, due to low re-use of memory accesses. This work shows that…

Mathematical Software · Computer Science 2022-04-11 Mathias Jacquelin , Mauricio Araya-Polo , Jie Meng

Sparse Tensor Cores offer exceptional performance gains for AI workloads by exploiting structured 2:4 sparsity. However, their potential remains untapped for core scientific workloads such as stencil computations, which exhibit irregular…

Computational Engineering, Finance, and Science · Computer Science 2025-07-01 Qi Li , Kun Li , Haozhi Han , Liang Yuan , Junshi Chen , Yunquan Zhang , Yifeng Chen , Hong An , Ting Cao , Mao Yang

This paper investigates the multi-GPU performance of a 3D buoyancy driven cavity solver using MPI and OpenACC directives on different platforms. The paper shows that decomposing the total problem in different dimensions affects the strong…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-10 Weicheng Xue , Christopher J. Roy

Memory bandwidth is known to be a performance bottleneck for FPGA accelerators, especially when they deal with large multi-dimensional data-sets. A large body of work focuses on reducing of off-chip transfers, but few authors try to improve…

Hardware Architecture · Computer Science 2024-01-23 Corentin Ferry , Nicolas Derumigny , Steven Derrien , Sanjay Rajopadhye

Stencil computation is one of the most important kernels in various scientific and engineering applications. A variety of work has focused on vectorization techniques, aiming at exploiting the in-core data parallelism. Briefly, they either…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-03-18 Kun Li , Liang Yuan , Yunquan Zhang , Yue Yue , Hang Cao , Pengqi Lu

The computational power of High-Performance Computing (HPC) systems is constantly increasing, however, their input/output (IO) performance grows relatively slowly, and their storage capacity is also limited. This unbalance presents…

This work presents Squeeze, an efficient compact fractal processing scheme for tensor core GPUs. By combining discrete-space transformations between compact and expanded forms, one can do data-parallel computation on a fractal with…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-01-04 Felipe A. Quezada , Cristóbal A. Navarro , Nancy Hitschfeld , Benjamin Bustos

Recent research has focused on accelerating stencil computations by exploiting emerging hardware like Tensor Cores. To leverage these accelerators, the stencil operation must be transformed to matrix multiplications. However, this…

Distributed, Parallel, and Cluster Computing · Computer Science 2026-01-27 Qiqi GU , Chenpeng Wu , Heng Shi , Jianguo Yao

The exponential growth of floating point power in graphics processing units (GPUs), together with their low cost, has given rise to an attractive platform upon which to deploy lattice QCD calculations. GPUs are essentially many (O(100))…

High Energy Physics - Lattice · Physics 2010-11-05 M. A. Clark

We present an out-of-core hydrodynamic code for high resolution cosmological simulations that require terabytes of memory. Out-of-core computation refers to the technique of using disk space as virtual memory and transferring data in and…

Astrophysics · Physics 2007-05-23 Hy Trac , Ue-Li Pen

Connected components and spanning forest are fundamental graph algorithms due to their use in many important applications, such as graph clustering and image segmentation. GPUs are an ideal platform for graph algorithms due to their high…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-28 Changwan Hong , Laxman Dhulipala , Julian Shun

Over the past few years, there has been an increased interest in including FPGAs in data centers and high-performance computing clusters along with GPUs and other accelerators. As a result, it has become increasingly important to have a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-14 Mostafa Eghbali Zarch , Reece Neff , Michela Becchi