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Encoding data structures store enough information to answer the queries they are meant to support but not enough to recover their underlying datasets. In this paper we give the first encoding data structure for the challenging problem of…

Data Structures and Algorithms · Computer Science 2017-02-21 Travis Gagie , Giovanni Manzini , Rossano Venturini

We present an online algorithm to deal with pattern matching in strings. The problem we investigate is commonly known as string matching with mismatches in which the objective is to report the number of characters that match when a pattern…

Data Structures and Algorithms · Computer Science 2016-03-11 Vinodprasad P

We exhibit an online algorithm finding all distinct palindromes inside a given string in time $\Theta(n\log|\Sigma|)$ over an ordered alphabet and in time $\Theta(n|\Sigma|)$ over an unordered alphabet. Using a reduction from a…

Data Structures and Algorithms · Computer Science 2013-05-14 Dmitry Kosolobov , Mikhail Rubinchik , Arseny M. Shur

As is the case of many signals produced by complex systems, language presents a statistical structure that is balanced between order and disorder. Here we review and extend recent results from quantitative characterisations of the degree of…

Computation and Language · Computer Science 2015-03-05 Marcelo A Montemurro , Damián H Zanette

This study develops an algorithm to solve a variation of the Shortest Common Superstring (SCS) problem. There are two modifications to the base SCS problem. First, one string in the set S is allowed to have up to K mistakes, defined as not…

Data Structures and Algorithms · Computer Science 2024-11-05 Arthur Gilfanov

We revisit the selection problem, namely that of computing the $i$th order statistic of $n$ given elements, in particular the classic deterministic algorithm by grouping and partition due to Blum, Floyd, Pratt, Rivest, and Tarjan (1973).…

Data Structures and Algorithms · Computer Science 2019-04-09 Ke Chen , Adrian Dumitrescu

It is well known that n integers in the range [1,n^c] can be sorted in O(n) time in the RAM model using radix sorting. More generally, integers in any range [1,U] can be sorted in O(n sqrt{loglog n}) time. However, these algorithms use O(n)…

Data Structures and Algorithms · Computer Science 2007-06-29 Gianni Franceschini , S. Muthukrishnan , Mihai Patrascu

String matching is the problem of finding all the substrings of a text which match a given pattern. It is one of the most investigated problems in computer science, mainly due to its very diverse applications in several fields. Recently,…

Data Structures and Algorithms · Computer Science 2017-07-04 Domenico Cantone , Simone Faro , Arianna Pavone

In the Shortest-Superstring problem, we are given a set of strings S and want to find a string that contains all strings in S as substrings and has minimum length. This is a classical problem in approximation and the best known…

Data Structures and Algorithms · Computer Science 2016-11-11 Marcin Mucha

Bitmap indexes must be compressed to reduce input/output costs and minimize CPU usage. To accelerate logical operations (AND, OR, XOR) over bitmaps, we use techniques based on run-length encoding (RLE), such as Word-Aligned Hybrid (WAH)…

Databases · Computer Science 2016-08-02 Daniel Lemire , Owen Kaser , Kamel Aouiche

Word Break is a prototypical factorization problem in string processing: Given a word $w$ of length $N$ and a dictionary $\mathcal{D} = \{d_1, d_2, \ldots, d_{K}\}$ of $K$ strings, determine whether we can partition $w$ into words from…

Data Structures and Algorithms · Computer Science 2025-06-19 Rajat De , Dominik Kempa

We investigate the order of the variance of the optimal alignments score of two independent iid binary random words having the same length. The letters are equiprobable, but the scoring function is such that one letter has a larger score…

Probability · Mathematics 2016-06-17 Christian Houdré , Heinrich Matzinger

Determining whether an unordered collection of overlapping substrings (called shingles) can be uniquely decoded into a consistent string is a problem that lies within the foundation of a broad assortment of disciplines ranging from…

Discrete Mathematics · Computer Science 2012-04-17 Aryeh Kontorovich , Ari Trachtenberg

If a string is cyclically shifted it will re-appear after a certain number of shifts, which will be called its order. We solve the problem of how many strings exist with a given order. This problem arises in the context of quantum mechanics…

Mathematical Physics · Physics 2007-05-23 K. Baerwinkel , H. -J. Schmidt , J. Schnack

Approximate string matching is the problem of finding all factors of a text t of length n that are at a distance at most k from a pattern x of length m. Approximate circular string matching is the problem of finding all factors of t that…

Data Structures and Algorithms · Computer Science 2016-04-26 Carl Barton , Costas S. Iliopoulos , Solon P. Pissis

We study the fundamental problem of finding the best string to represent a given set, in the form of the Closest String problem: Given a set $X \subseteq \Sigma^d$ of $n$ strings, find the string $x^*$ minimizing the radius of the smallest…

Computational Complexity · Computer Science 2023-05-30 Amir Abboud , Nick Fischer , Elazar Goldenberg , Karthik C. S. , Ron Safier

In the Shortest Common Superstring problem (SCS), one needs to find the shortest superstring for a set of strings. While SCS is NP-hard and MAX-SNP-hard, the Greedy Algorithm "choose two strings with the largest overlap; merge them; repeat"…

Data Structures and Algorithms · Computer Science 2021-02-11 Maksim Nikolaev

We study quantum algorithms for several fundamental string problems, including Longest Common Substring, Lexicographically Minimal String Rotation, and Longest Square Substring. These problems have been widely studied in the stringology…

Data Structures and Algorithms · Computer Science 2021-10-22 Shyan Akmal , Ce Jin

In this paper we present two algorithms for the following problem: given a string and a rational $e > 1$, detect in the online fashion the earliest occurrence of a repetition of exponent $\ge e$ in the string. 1. The first algorithm…

Data Structures and Algorithms · Computer Science 2015-05-04 Dmitry Kosolobov

We study the task, for a given language $L$, of enumerating the (generally infinite) sequence of its words, without repetitions, while bounding the delay between two consecutive words. To allow for delay bounds that do not depend on the…

Formal Languages and Automata Theory · Computer Science 2023-01-10 Antoine Amarilli , Mikaël Monet
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