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Related papers: Fast Computation of Zigzag Persistence

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We construct a zig-zag process targeting a posterior distribution defined on a hybrid state space consisting of both discrete and continuous variables. The construction does not require any assumptions on the structure among discrete…

Computation · Statistics 2024-01-30 Jere Koskela

We introduce a fast and memory efficient approach to compute the persistent homology (PH) of a sequence of simplicial complexes. The basic idea is to simplify the complexes of the input sequence by using strong collapses, as introduced by…

Computational Geometry · Computer Science 2018-10-01 Jean-Daniel Boissonnat , Siddharth Pritam , Divyansh Pareek

We extend the persistence algorithm, viewed as an algorithm computing the homology of a complex of free persistence or graded modules, to complexes of modules that are not free. We replace persistence modules by their presentations and…

Algebraic Topology · Mathematics 2024-03-19 Tamal K. Dey , Florian Russold , Shreyas N. Samaga

Extended and zigzag persistence were introduced more than ten years ago, as generalizations of ordinary persistence. While overcoming certain limitations of ordinary persistence, they both enjoy nice computational properties, which make…

Algebraic Topology · Mathematics 2023-04-24 Nicolas Berkouk , Luca Nyckees

Extended persistence is a technique from topological data analysis to obtain global multiscale topological information from a graph. This includes information about connected components and cycles that are captured by the so-called…

Machine Learning · Computer Science 2024-06-06 Simon Zhang , Soham Mukherjee , Tamal K. Dey

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

We define persistent homology groups over any set of spaces which have inclusions defined so that the corresponding directed graph between the spaces is acyclic, as well as along any subgraph of this directed graph. This method…

Computational Geometry · Computer Science 2019-06-20 Erin Wolf Chambers , David Letscher

In standard persistent homology, a persistent cycle born and dying with a persistence interval (bar) associates the bar with a concrete topological representative, which provides means to effectively navigate back from the barcode to the…

Computational Geometry · Computer Science 2025-03-03 Tamal K. Dey , Tao Hou , Anirudh Pulavarthy

By general case we mean methods able to process simplicial sets and chain complexes not of finite type. A filtration of the object to be studied is the heart of both subjects persistent homology and spectral sequences. In this paper we…

Computational Geometry · Computer Science 2014-04-01 Ana Romero , Jónathan Heras , Julio Rubio , Francis Sergeraert

The Collatz conjecture, which posits that any positive integer will eventually reach 1 through a specific iterative process, is a classic unsolved problem in mathematics. This research focuses on designing an efficient algorithm to compute…

Mathematical Software · Computer Science 2025-07-02 Eyob Solomon Getachew , Beakal Gizachew Assefa

Sorting is a foundational primitive in modern data processing, influencing the execution speed of high-performance data pipelines. However, the algorithmic landscape is currently bifurcated by a pervasive "Stability Tax": practitioners must…

Data Structures and Algorithms · Computer Science 2026-05-15 Hriday Jain , Ketan Sabale , Aditya Shastri , Hiren Kumar Thakkar , Ashutosh Londhe

This paper develops the idea of homology for 1-parameter families of topological spaces. We express parametrized homology as a collection of real intervals with each corresponding to a homological feature supported over that interval or,…

Algebraic Topology · Mathematics 2019-03-20 Gunnar Carlsson , Vin de Silva , Sara Kalisnik , Dmitriy Morozov

Standard MCMC methods can scale poorly to big data settings due to the need to evaluate the likelihood at each iteration. There have been a number of approximate MCMC algorithms that use sub-sampling ideas to reduce this computational…

Computation · Statistics 2020-09-29 Joris Bierkens , Paul Fearnhead , Gareth Roberts

Fountain codes are erasure correcting codes realizing reliable communication systems for the multicast on the Internet. The zigzag decodable fountain (ZDF) code is one of generalization of the Raptor code, i.e, applying shift operation to…

Information Theory · Computer Science 2018-04-17 Yoshihiro Murayama , Takayuki Nozaki

Given a zigzag filtration, we want to find its barcode representatives, i.e., a compatible choice of bases for the homology groups that diagonalize the linear maps in the zigzag. To achieve this, we convert the input zigzag to a levelset…

Computational Geometry · Computer Science 2025-02-26 Tamal K. Dey , Tao Hou , Dmitriy Morozov

This paper proposes a fountain coding system which has lower space decoding complexity and lower decoding erasure rate than the Raptor coding systems. The main idea of the proposed fountain code is employing shift and exclusive OR to…

Information Theory · Computer Science 2017-08-30 Takayuki Nozaki

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

The persistence barcode is a topological descriptor of data that plays a fundamental role in topological data analysis. Given a filtration of the space of data, a persistence barcode tracks the evolution of its homological features. In this…

Computational Geometry · Computer Science 2024-09-11 Salman Parsa , Bei Wang

Whereas the ability of deep networks to produce useful predictions has been amply demonstrated, estimating the reliability of these predictions remains challenging. Sampling approaches such as MC-Dropout and Deep Ensembles have emerged as…

Machine Learning · Computer Science 2024-05-28 Nikita Durasov , Nik Dorndorf , Hieu Le , Pascal Fua

We study the computational complexity of zigzag sampling algorithm for strongly log-concave distributions. The zigzag process has the advantage of not requiring time discretization for implementation, and that each proposed bouncing event…

Machine Learning · Statistics 2022-06-07 Jianfeng Lu , Lihan Wang