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With the advent of artificial intelligence (AI), many researchers are attempting to extract structured information from document-level biomedical literature by fine-tuning large language models (LLMs). However, they face significant…

Neural and Evolutionary Computing · Computer Science 2026-02-26 Lei Zhao , Ling Kang , Quan Guo

Prompt-based fine-tuning for pre-trained models has proven effective for many natural language processing tasks under few-shot settings in general domain. However, tuning with prompt in biomedical domain has not been investigated…

Computation and Language · Computer Science 2023-04-17 Haochun Wang , Chi Liu , Nuwa Xi , Sendong Zhao , Meizhi Ju , Shiwei Zhang , Ziheng Zhang , Yefeng Zheng , Bing Qin , Ting Liu

Relation extraction is a fundamental problem in natural language processing. Most existing models are defined for relation extraction in the general domain. However, their performance on specific domains (e.g., biomedicine) is yet unclear.…

Computation and Language · Computer Science 2021-12-14 Yongkang Li

Pre-trained language models have contributed significantly to relation extraction by demonstrating remarkable few-shot learning abilities. However, prompt tuning methods for relation extraction may still fail to generalize to those rare or…

Computation and Language · Computer Science 2023-09-20 Xiang Chen , Lei Li , Ningyu Zhang , Chuanqi Tan , Fei Huang , Luo Si , Huajun Chen

Large language models (LLMs) have shown great potential in medical question answering (MedQA), yet adapting them to biomedical reasoning remains challenging due to domain-specific complexity and limited supervision. In this work, we study…

Computation and Language · Computer Science 2025-11-12 Chenqian Le , Ziheng Gong , Chihang Wang , Haowei Ni , Panfeng Li , Xupeng Chen

Relation Extraction (RE) is a crucial task in Information Extraction, which entails predicting relationships between entities within a given sentence. However, extending pre-trained RE models to other languages is challenging, particularly…

Computation and Language · Computer Science 2023-04-21 Chiaming Hsu , Changtong Zan , Liang Ding , Longyue Wang , Xiaoting Wang , Weifeng Liu , Fu Lin , Wenbin Hu

Recently, prompt-tuning has achieved promising results for specific few-shot classification tasks. The core idea of prompt-tuning is to insert text pieces (i.e., templates) into the input and transform a classification task into a masked…

Computation and Language · Computer Science 2023-09-19 Xiang Chen , Ningyu Zhang , Xin Xie , Shumin Deng , Yunzhi Yao , Chuanqi Tan , Fei Huang , Luo Si , Huajun Chen

Large language models (LLMs) have shown remarkable capabilities in Natural Language Processing (NLP), especially in domains where labeled data is scarce or expensive, such as clinical domain. However, to unlock the clinical knowledge hidden…

Computation and Language · Computer Science 2023-09-18 Sonish Sivarajkumar , Mark Kelley , Alyssa Samolyk-Mazzanti , Shyam Visweswaran , Yanshan Wang

The large language models have achieved superior performance on various natural language tasks. One major drawback of such approaches is they are resource-intensive in fine-tuning new datasets. Soft-prompt tuning presents a…

Computation and Language · Computer Science 2023-10-30 Guoxin Chen , Yiming Qian , Bowen Wang , Liangzhi Li

Relation extraction aims to classify the relationships between two entities into pre-defined categories. While previous research has mainly focused on sentence-level relation extraction, recent studies have expanded the scope to…

Computation and Language · Computer Science 2023-10-16 Chufan Gao , Xulin Fan , Jimeng Sun , Xuan Wang

Cutting edge techniques developed in the general NLP domain are often subsequently applied to the high-value, data-rich biomedical domain. The past few years have seen generative language models (LMs), instruction finetuning, and few-shot…

Computation and Language · Computer Science 2025-07-28 Aviv Brokman , Ramakanth Kavuluru

The remarkable success of pretrained language models has motivated the study of what kinds of knowledge these models learn during pretraining. Reformulating tasks as fill-in-the-blanks problems (e.g., cloze tests) is a natural approach for…

Computation and Language · Computer Science 2020-11-10 Taylor Shin , Yasaman Razeghi , Robert L. Logan , Eric Wallace , Sameer Singh

Pre-trained large language models can perform natural language processing downstream tasks by conditioning on human-designed prompts. However, a prompt-based approach often requires "prompt engineering" to design different prompts,…

Computation and Language · Computer Science 2024-05-28 Mingyang Song , Yi Feng , Liping Jing

Prompting pre-trained language models has achieved impressive performance on various NLP tasks, especially in low data regimes. Despite the success of prompting in monolingual settings, applying prompt-based methods in multilingual…

Computation and Language · Computer Science 2022-10-27 Yuxuan Chen , David Harbecke , Leonhard Hennig

Recently, prompt-based learning has gained popularity across many natural language processing (NLP) tasks by reformulating them into a cloze-style format to better align pre-trained language models (PLMs) with downstream tasks. However,…

Computation and Language · Computer Science 2023-08-15 Wenjie Zhang , Xiaoning Song , Zhenhua Feng , Tianyang Xu , Xiaojun Wu

The dialogue-based relation extraction (DialogRE) task aims to predict the relations between argument pairs that appear in dialogue. Most previous studies utilize fine-tuning pre-trained language models (PLMs) only with extensive features…

Computation and Language · Computer Science 2022-09-28 Junyoung Son , Jinsung Kim , Jungwoo Lim , Heuiseok Lim

Objective To develop soft prompt-based learning algorithms for large language models (LLMs), examine the shape of prompts, prompt-tuning using frozen/unfrozen LLMs, transfer learning, and few-shot learning abilities. Methods We developed a…

Computation and Language · Computer Science 2024-04-16 Cheng Peng , Xi Yang , Kaleb E Smith , Zehao Yu , Aokun Chen , Jiang Bian , Yonghui Wu

Few-shot relation extraction aims to learn to identify the relation between two entities based on very limited training examples. Recent efforts found that textual labels (i.e., relation names and relation descriptions) could be extremely…

Computation and Language · Computer Science 2022-10-26 Peiyuan Zhang , Wei Lu

Prompt-based fine-tuning has become an essential method for eliciting information encoded in pre-trained language models for a variety of tasks, including text classification. For multi-class classification tasks, prompt-based fine-tuning…

Computation and Language · Computer Science 2024-10-04 Zhiwen You , Kanyao Han , Haotian Zhu , Bertram Ludäscher , Jana Diesner

Prompt learning is one of the most effective paradigms for adapting pre-trained vision-language models (VLMs) to the biomedical image classification tasks in few shot scenarios. However, most of the current prompt learning methods only used…

Computer Vision and Pattern Recognition · Computer Science 2025-05-09 Wei Peng , Kang Liu , Jianchen Hu , Meng Zhang
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