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Related papers: Motif Cut Sparsifiers

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We address the problem of computing the distribution of induced connected subgraphs, aka \emph{graphlets} or \emph{motifs}, in large graphs. The current state-of-the-art algorithms estimate the motif counts via uniform sampling, by…

Data Structures and Algorithms · Computer Science 2021-07-20 Marco Bressan , Stefano Leucci , Alessandro Panconesi

Sketching and streaming algorithms are in the forefront of current research directions for cut problems in graphs. In the streaming model, we show that $(1-\epsilon)$-approximation for Max-Cut must use $n^{1-O(\epsilon)}$ space; moreover,…

Data Structures and Algorithms · Computer Science 2026-02-23 Dmitry Kogan , Robert Krauthgamer

We develop new methods based on graph motifs for graph clustering, allowing more efficient detection of communities within networks. We focus on triangles within graphs, but our techniques extend to other clique motifs as well. Our…

Data Structures and Algorithms · Computer Science 2017-02-07 Charalampos Tsourakakis , Jakub Pachocki , Michael Mitzenmacher

Graphs arising in statistical problems, signal processing, large networks, combinatorial optimization, and data analysis are often dense, which causes both computational and storage bottlenecks. One way of \textit{sparsifying} a…

Numerical Analysis · Mathematics 2023-04-27 Neophytos Charalambides , Alfred O. Hero

We present a general toolbox, based on new vertex sparsifiers, for designing data structures to maintain shortest paths in dynamic graphs. In an $m$-edge graph undergoing edge insertions and deletions, our data structures give the first…

Data Structures and Algorithms · Computer Science 2023-11-14 Rasmus Kyng , Simon Meierhans , Maximilian Probst Gutenberg

One fundamental problem in temporal graph analysis is to count the occurrences of small connected subgraph patterns (i.e., motifs), which benefits a broad range of real-world applications, such as anomaly detection, structure prediction,…

Machine Learning · Computer Science 2022-04-21 Zhongqiang Gao , Chuanqi Cheng , Yanwei Yu , Lei Cao , Chao Huang , Junyu Dong

Exploring statistics of locally connected subgraph patterns (also known as network motifs) has helped researchers better understand the structure and function of biological and online social networks (OSNs). Nowadays the massive size of…

Social and Information Networks · Computer Science 2014-03-28 Pinghui Wang , John C. S. Lui , Bruno Ribeiro , Don Towsley , Junzhou Zhao , Xiaohong Guan

In this paper we initiate the study of expander decompositions of a graph $G=(V, E)$ in the streaming model of computation. The goal is to find a partitioning $\mathcal{C}$ of vertices $V$ such that the subgraphs of $G$ induced by the…

Data Structures and Algorithms · Computer Science 2023-08-04 Arnold Filtser , Michael Kapralov , Mikhail Makarov

Graph sparsification has been studied extensively over the past two decades, culminating in spectral sparsifiers of optimal size (up to constant factors). Spectral hypergraph sparsification is a natural analogue of this problem, for which…

Data Structures and Algorithms · Computer Science 2021-06-07 Michael Kapralov , Robert Krauthgamer , Jakab Tardos , Yuichi Yoshida

Graph sparsification is an area of interest in computer science and applied mathematics. Sparsification of a graph, in general, aims to reduce the number of edges in the network while preserving specific properties of the graph, like cuts…

Social and Information Networks · Computer Science 2025-10-07 Abhishek Ajayakumar , Soumyendu Raha

Given a $k$-node pattern graph $H$ and an $n$-node host graph $G$, the subgraph counting problem asks to compute the number of copies of $H$ in $G$. In this work we address the following question: can we count the copies of $H$ faster if…

Computational Complexity · Computer Science 2020-09-01 Marco Bressan

To cope with the complexity of large networks, a number of dimensionality reduction techniques for graphs have been developed. However, the extent to which information is lost or preserved when these techniques are employed has not yet been…

Molecular Networks · Quantitative Biology 2015-08-28 Hector Zenil , Narsis A. Kiani , Jesper Tegnér

Graph Neural Network (GNN) achieves great success for node-level and graph-level tasks via encoding meaningful topological structures of networks in various domains, ranging from social to biological networks. However, repeated aggregation…

Machine Learning · Computer Science 2025-08-26 Tanvir Hossain , Khaled Mohammed Saifuddin , Muhammad Ifte Khairul Islam , Farhan Tanvir , Esra Akbas

Physical and functional constraints on biological networks lead to complex topological patterns across multiple scales in their organization. A particular type of higher-order network feature that has received considerable interest is…

Quantitative Methods · Quantitative Biology 2024-10-15 Alexis Bénichou , Jean-Baptiste Masson , Christian L. Vestergaard

We investigate the problem of producing structured graph representations of visual scenes. Our work analyzes the role of motifs: regularly appearing substructures in scene graphs. We present new quantitative insights on such repeated…

Computer Vision and Pattern Recognition · Computer Science 2018-03-30 Rowan Zellers , Mark Yatskar , Sam Thomson , Yejin Choi

Several natural and theoretical networks can be broken down into smaller portions, or subgraphs corresponding to neighborhoods. The more frequent of these neighborhoods can then be understood as motifs of the network, being therefore…

Physics and Society · Physics 2022-04-21 Guilherme S. Domingues , Eric K. Tokuda , Luciano da F. Costa

Flow sparsification is a classic graph compression technique which, given a capacitated graph $G$ on $k$ terminals, aims to construct another capacitated graph $H$, called a flow sparsifier, that preserves, either exactly or approximately,…

Data Structures and Algorithms · Computer Science 2024-09-09 Syamantak Das , Nikhil Kumar , Daniel Vaz

A new heuristic based on vertex invariants is developed to rapidly distinguish non-isomorphic graphs to a desired level of accuracy. The method is applied to sample subgraphs from an E.coli protein interaction network, and as a probe for…

Quantitative Methods · Quantitative Biology 2009-11-13 Kim Baskerville , Maya Paczuski

We introduce a new method for finding network motifs: interesting or informative subgraph patterns in a network. Subgraphs are motifs when their frequency in the data is high compared to the expected frequency under a null model. To compute…

Machine Learning · Computer Science 2021-04-19 Peter Bloem , Steven de Rooij

A $k$-motif (or graphlet) is a subgraph on $k$ nodes in a graph or network. Counting of motifs in complex networks has been a well-studied problem in network analysis of various real-word graphs arising from the study of social networks and…

Social and Information Networks · Computer Science 2020-04-02 Taha Sevim , Muhammet Selçuk Güvel , Lale Özkahya
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