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Brain tumor segmentation is a fundamental step in assessing a patient's cancer progression. However, manual segmentation demands significant expert time to identify tumors in 3D multimodal brain MRI scans accurately. This reliance on manual…

Image and Video Processing · Electrical Eng. & Systems 2024-05-07 Fadillah Maani , Anees Ur Rehman Hashmi , Numan Saeed , Mohammad Yaqub

Automatic segmentation of the fetal brain is still challenging due to the health state of fetal development, motion artifacts, and variability across gestational ages, since existing methods rely on high-quality datasets of healthy fetuses.…

Image and Video Processing · Electrical Eng. & Systems 2024-05-27 Zhigao Cai , Xing-Ming Zhao

Segmenting deep brain structures from magnetic resonance images is important for patient diagnosis, surgical planning, and research. Most current state-of-the-art solutions follow a segmentation-by-registration approach, where subject MRIs…

Image and Video Processing · Electrical Eng. & Systems 2022-05-20 Mehri Baniasadi , Mikkel V. Petersen , Jorge Goncalves , Andreas Horn , Vanja Vlasov , Frank Hertel , Andreas Husch

Preterm infants (born between 28 and 37 weeks of gestation) face elevated risks of neurodevelopmental delays, making early identification crucial for timely intervention. While deep learning-based volumetric segmentation of brain MRI scans…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Lexin Ren , Jiamiao Lu , Weichuan Zhang , Benqing Wu , Tuo Wang , Yi Liao , Jiapan Guo , Changming Sun , Liang Guo

Segmentation of brain tumors is a critical step in treatment planning, yet manual segmentation is both time-consuming and subjective, relying heavily on the expertise of radiologists. In Sub-Saharan Africa, this challenge is magnified by…

A myriad of algorithms for the automatic analysis of brain MR images is available to support clinicians in their decision-making. For brain tumor patients, the image acquisition time series typically starts with an already pathological…

Image and Video Processing · Electrical Eng. & Systems 2024-09-24 Florian Kofler , Felix Meissen , Felix Steinbauer , Robert Graf , Stefan K Ehrlich , Annika Reinke , Eva Oswald , Diana Waldmannstetter , Florian Hoelzl , Izabela Horvath , Oezguen Turgut , Suprosanna Shit , Christina Bukas , Kaiyuan Yang , Johannes C. Paetzold , Ezequiel de da Rosa , Isra Mekki , Shankeeth Vinayahalingam , Hasan Kassem , Juexin Zhang , Ke Chen , Ying Weng , Alicia Durrer , Philippe C. Cattin , Julia Wolleb , M. S. Sadique , M. M. Rahman , W. Farzana , A. Temtam , K. M. Iftekharuddin , Maruf Adewole , Syed Muhammad Anwar , Ujjwal Baid , Anastasia Janas , Anahita Fathi Kazerooni , Dominic LaBella , Hongwei Bran Li , Ahmed W Moawad , Gian-Marco Conte , Keyvan Farahani , James Eddy , Micah Sheller , Sarthak Pati , Alexandros Karagyris , Alejandro Aristizabal , Timothy Bergquist , Verena Chung , Russell Takeshi Shinohara , Farouk Dako , Walter Wiggins , Zachary Reitman , Chunhao Wang , Xinyang Liu , Zhifan Jiang , Elaine Johanson , Zeke Meier , Ariana Familiar , Christos Davatzikos , John Freymann , Justin Kirby , Michel Bilello , Hassan M Fathallah-Shaykh , Roland Wiest , Jan Kirschke , Rivka R Colen , Aikaterini Kotrotsou , Pamela Lamontagne , Daniel Marcus , Mikhail Milchenko , Arash Nazeri , Marc-André Weber , Abhishek Mahajan , Suyash Mohan , John Mongan , Christopher Hess , Soonmee Cha , Javier Villanueva-Meyer , Errol Colak , Priscila Crivellaro , Andras Jakab , Abiodun Fatade , Olubukola Omidiji , Rachel Akinola Lagos , O O Olatunji , Goldey Khanna , John Kirkpatrick , Michelle Alonso-Basanta , Arif Rashid , Miriam Bornhorst , Ali Nabavizadeh , Natasha Lepore , Joshua Palmer , Antonio Porras , Jake Albrecht , Udunna Anazodo , Mariam Aboian , Evan Calabrese , Jeffrey David Rudie , Marius George Linguraru , Juan Eugenio Iglesias , Koen Van Leemput , Spyridon Bakas , Benedikt Wiestler , Ivan Ezhov , Marie Piraud , Bjoern H Menze

Pediatric brain tumor segmentation presents unique challenges due to the rarity and heterogeneity of these malignancies, yet remains critical for clinical diagnosis and treatment planning. We propose an ensemble approach integrating…

Image and Video Processing · Electrical Eng. & Systems 2025-10-13 Yuxiao Yi , Qingyao Zhuang , Zhi-Qin John Xu , Xiaowen Wang , Yan Ren , Tianming Qiu

The segmentation of brain tumors in multimodal MRIs is one of the most challenging tasks in medical image analysis. The recent state of the art algorithms solving this task is based on machine learning approaches and deep learning in…

Image and Video Processing · Electrical Eng. & Systems 2020-02-11 Dmitrii Lachinov , Elena Shipunova , Vadim Turlapov

Recently, federated learning has raised increasing interest in the medical image analysis field due to its ability to aggregate multi-center data with privacy-preserving properties. A large amount of federated training schemes have been…

Computer Vision and Pattern Recognition · Computer Science 2024-10-24 Matthis Manthe , Stefan Duffner , Carole Lartizien

Objective: Magnetic resonance imaging (MRI) has been widely used for the analysis and diagnosis of brain diseases. Accurate and automatic brain tumor segmentation is of paramount importance for radiation treatment. However, low tissue…

Image and Video Processing · Electrical Eng. & Systems 2022-04-18 Jiangyun Li , Hong Yu , Chen Chen , Meng Ding , Sen Zha

Purpose: The goal of this work was to develop a deep network for whole-head segmentation including clinical MRIs with abnormal anatomy, and compile the first public benchmark dataset for this purpose. We collected 98 MRIs with volumetric…

Image and Video Processing · Electrical Eng. & Systems 2025-09-04 Andrew M Birnbaum , Adam Buchwald , Peter Turkeltaub , Adam Jacks , George Carra , Shreya Kannana , Yu Huang , Abhisheck Datta , Lucas C Parra , Lukas A Hirsch

Fetal brain imaging is a cornerstone of prenatal screening and early diagnosis of congenital anomalies. Knowledge of fetal gestational age is the key to the accurate assessment of brain development. This study develops an attention-based…

Computer Vision and Pattern Recognition · Computer Science 2018-12-19 Liyue Shen , Katie Shpanskaya , Edward Lee , Emily McKenna , Maryam Maleki , Quin Lu , Safwan Halabi , John Pauly , Kristen Yeom

Brain tissue segmentation from multimodal MRI is a key building block of many neuroimaging analysis pipelines. Established tissue segmentation approaches have, however, not been developed to cope with large anatomical changes resulting from…

Image and Video Processing · Electrical Eng. & Systems 2020-11-05 Reuben Dorent , Thomas Booth , Wenqi Li , Carole H. Sudre , Sina Kafiabadi , Jorge Cardoso , Sebastien Ourselin , Tom Vercauteren

We present the design and results of the MICCAI Federated Tumor Segmentation (FeTS) Challenge 2024, which focuses on federated learning (FL) for glioma sub-region segmentation in multi-parametric MRI and evaluates new weight aggregation…

Medical image segmentation plays a crucial role in clinical diagnosis and treatment planning, where accurate boundary delineation is essential for precise lesion localization, organ identification, and quantitative assessment. In recent…

Image and Video Processing · Electrical Eng. & Systems 2026-05-26 Peiting Tian , Xi Chen , Haixia Bi , Fan Li

We propose a segmentation framework that uses deep neural networks and introduce two innovations. First, we describe a biophysics-based domain adaptation method. Second, we propose an automatic method to segment white and gray matter, and…

Computer Vision and Pattern Recognition · Computer Science 2018-10-16 Amir Gholami , Shashank Subramanian , Varun Shenoy , Naveen Himthani , Xiangyu Yue , Sicheng Zhao , Peter Jin , George Biros , Kurt Keutzer

Quantitative analysis of in utero human brain development is crucial for abnormal characterization. Magnetic resonance image (MRI) segmentation is therefore an asset for quantitative analysis. However, the development of automated…

Image and Video Processing · Electrical Eng. & Systems 2024-10-28 Priscille de Dumast , Meritxell Bach Cuadra

The integration of machine learning in magnetic resonance imaging (MRI), specifically in neuroimaging, is proving to be incredibly effective, leading to better diagnostic accuracy, accelerated image analysis, and data-driven insights, which…

With the advent of deep learning algorithms, fully automated radiological image analysis is within reach. In spine imaging, several atlas- and shape-based as well as deep learning segmentation algorithms have been proposed, allowing for…

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