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Integration of heterogeneous and high-dimensional multi-omics data is becoming increasingly important in understanding genetic data. Each omics technique only provides a limited view of the underlying biological process and integrating…

Machine Learning · Computer Science 2023-04-13 Chen Zhao , Anqi Liu , Xiao Zhang , Xuewei Cao , Zhengming Ding , Qiuying Sha , Hui Shen , Hong-Wen Deng , Weihua Zhou

Background: Canonical correlation analysis (CCA) is a classic statistical tool for investigating complex multivariate data. Correspondingly, it has found many diverse applications, ranging from molecular biology and medicine to social…

Methodology · Statistics 2019-01-14 Takoua Jendoubi , Korbinian Strimmer

Canonical Correlation Analysis (CCA) has been widely applied to jointly embed multiple views of data in a maximally correlated latent space. However, the alignment between various data perspectives, which is required by traditional…

Machine Learning · Computer Science 2023-12-11 Biqian Cheng , Evangelos E. Papalexakis , Jia Chen

A new approach to the sparse Canonical Correlation Analysis (sCCA)is proposed with the aim of discovering interpretable associations in very high-dimensional multi-view, i.e.observations of multiple sets of variables on the same subjects,…

Machine Learning · Statistics 2019-09-18 Omid S. Solari , James B. Brown , Peter J. Bickel

Discriminative Canonical Correlation Analysis (DCCA) is a powerful supervised feature extraction technique for two sets of multivariate data, which has wide applications in pattern recognition. DCCA consists of two parts: (i) mean-centering…

Quantum Physics · Physics 2022-06-14 Yong-Mei Li , Hai-Ling Liu , Shi-Jie Pan , Su-Juan Qin , Fei Gao , Qiao-Yan Wen

We propose Deep Multiset Canonical Correlation Analysis (dMCCA) as an extension to representation learning using CCA when the underlying signal is observed across multiple (more than two) modalities. We use deep learning framework to learn…

Machine Learning · Computer Science 2023-02-09 Krishna Somandepalli , Naveen Kumar , Ruchir Travadi , Shrikanth Narayanan

Recent advances in biological research have seen the emergence of high-throughput technologies with numerous applications that allow the study of biological mechanisms at an unprecedented depth and scale. A large amount of genomic data is…

Machine Learning · Statistics 2020-05-11 Nanwei Wang , Laurent Briollais , Helene Massam

We propose a new technique, Singular Vector Canonical Correlation Analysis (SVCCA), a tool for quickly comparing two representations in a way that is both invariant to affine transform (allowing comparison between different layers and…

Machine Learning · Statistics 2017-11-09 Maithra Raghu , Justin Gilmer , Jason Yosinski , Jascha Sohl-Dickstein

Canonical Correlation Analysis (CCA) is a classical tool for finding correlations among the components of two random vectors. In recent years, CCA has been widely applied to the analysis of genomic data, where it is common for researchers…

Machine Learning · Computer Science 2012-06-22 Sivaraman Balakrishnan , Kriti Puniyani , John Lafferty

This paper presents Deep Dynamic Probabilistic Canonical Correlation Analysis (D2PCCA), a model that integrates deep learning with probabilistic modeling to analyze nonlinear dynamical systems. Building on the probabilistic extensions of…

Machine Learning · Computer Science 2025-02-10 Shiqin Tang , Shujian Yu , Yining Dong , S. Joe Qin

Canonical Correlation Analysis (CCA) is a multivariate technique that takes two datasets and forms the most highly correlated possible pairs of linear combinations between them. Each subsequent pair of linear combinations is orthogonal to…

Methodology · Statistics 2015-12-22 Jacob Coleman , Joseph Replogle , Gabriel Chandler , Johanna Hardin

Regularised canonical correlation analysis was recently extended to more than two sets of variables by the multiblock method Regularised generalised canonical correlation analysis (RGCCA). Further, Sparse GCCA (SGCCA) was proposed to…

Canonical correlation analysis (CCA) is a classical representation learning technique for finding correlated variables in multi-view data. Several nonlinear extensions of the original linear CCA have been proposed, including kernel and deep…

Machine Learning · Computer Science 2016-02-09 Tomer Michaeli , Weiran Wang , Karen Livescu

The integration of multi-omics data has emerged as a promising approach for gaining comprehensive insights into complex diseases such as cancer. This paper proposes a novel approach to identify cancer subtypes through the integration of…

Machine Learning · Computer Science 2023-12-06 Mark Peelen , Leila Bagheriye , Johan Kwisthout

Regularized generalized canonical correlation analysis (RGCCA) is a generalization of regularized canonical correlation analysis to three or more sets of variables, which is a component-based approach aiming to study the relationships…

Statistics Theory · Mathematics 2025-03-21 Kuo-Yue Li , Qi-Ye Zhang , Yong-Han Sun

Regularized Generalized Canonical Correlation Analysis (RGCCA) is a general statistical framework for multi-block data analysis. RGCCA enables deciphering relationships between several sets of variables and subsumes many well-known…

Machine Learning · Statistics 2023-02-13 Fabien Girka , Arnaud Gloaguen , Laurent Le Brusquet , Violetta Zujovic , Arthur Tenenhaus

Canonical correlation analysis (CCA) is a powerful technique for discovering whether or not hidden sources are commonly present in two (or more) datasets. Its well-appreciated merits include dimensionality reduction, clustering,…

Machine Learning · Computer Science 2018-08-15 Jia Chen , Gang Wang , Yanning Shen , Georgios B. Giannakis

Learning representations of two views of data such that the resulting representations are highly linearly correlated is appealing in machine learning. In this paper, we present a canonical correlation guided learning framework, which allows…

Machine Learning · Computer Science 2024-10-01 Zhiwen Chen , Siwen Mo , Haobin Ke , Steven X. Ding , Zhaohui Jiang , Chunhua Yang , Weihua Gui

We study the problem of acoustic feature learning in the setting where we have access to another (non-acoustic) modality for feature learning but not at test time. We use deep variational canonical correlation analysis (VCCA), a recently…

Computer Vision and Pattern Recognition · Computer Science 2017-09-01 Qingming Tang , Weiran Wang , Karen Livescu

Multiview canonical correlation analysis (MCCA) seeks latent low-dimensional representations encountered with multiview data of shared entities (a.k.a. common sources). However, existing MCCA approaches do not exploit the geometry of the…

Signal Processing · Electrical Eng. & Systems 2019-05-22 Jia Chen , Gang Wang , Georgios B. Giannakis