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Semi-supervised node classification in attributed graphs, i.e., graphs with node features, involves learning to classify unlabeled nodes given a partially labeled graph. Label predictions are made by jointly modeling the node and its'…

Machine Learning · Computer Science 2018-09-24 Priyesh Vijayan , Yash Chandak , Mitesh M. Khapra , Srinivasan Parthasarathy , Balaraman Ravindran

Node classification on graphs is an important research problem with many applications. Real-world graph data sets may not be balanced and accurate as assumed by most existing works. A challenging setting is positive-unlabeled (PU) node…

Machine Learning · Computer Science 2023-10-23 Hansi Yang , Yongqi Zhang , Quanming Yao , James Kwok

We study the behavior of a label propagation algorithm (LPA) on the Erd\H{o}s-R\'enyi random graph $\mathcal{G}(n,p)$. Initially, given a network, each vertex starts with a random label in the interval $[0,1]$. Then, in each round of LPA,…

Probability · Mathematics 2025-05-23 Marcos Kiwi , Lyuben Lichev , Dieter Mitsche , Paweł Prałat

Inferring missing links or detecting spurious ones based on observed graphs, known as link prediction, is a long-standing challenge in graph data analysis. With the recent advances in deep learning, graph neural networks have been used for…

Social and Information Networks · Computer Science 2023-01-03 Xingping Xian , Tao Wu , Xiaoke Ma , Shaojie Qiao , Yabin Shao , Chao Wang , Lin Yuan , Yu Wu

In this paper we propose a domain adaptation algorithm designed for graph domains. Given a source graph with many labeled nodes and a target graph with few or no labeled nodes, we aim to estimate the target labels by making use of the…

Machine Learning · Computer Science 2021-12-02 Yusuf Yigit Pilavci , Eylem Tugce Guneyi , Cemil Cengiz , Elif Vural

In this paper, for the first time, we study label propagation in heterogeneous graphs under heterophily assumption. Homophily label propagation (i.e., two connected nodes share similar labels) in homogeneous graph (with same types of…

Machine Learning · Computer Science 2017-01-24 Dingxiong Deng , Fan Bai , Yiqi Tang , Shuigeng Zhou , Cyrus Shahabi , Linhong Zhu

Graph Neural Networks have achieved remarkable accuracy in semi-supervised node classification tasks. However, these results lack reliable uncertainty estimates. Conformal prediction methods provide a theoretical guarantee for node…

Machine Learning · Computer Science 2025-01-07 Jianqing Song , Jianguo Huang , Wenyu Jiang , Baoming Zhang , Shuangjie Li , Chongjun Wang

Graph neural networks (GNNs) have achieved superior performance on node classification tasks in the last few years. Commonly, this is framed in a transductive semi-supervised learning setup wherein the entire graph, including the target…

Machine Learning · Computer Science 2021-10-11 Artun Bayer , Arindam Chowdhury , Santiago Segarra

Graph kernels are kernel methods measuring graph similarity and serve as a standard tool for graph classification. However, the use of kernel methods for node classification, which is a related problem to graph representation learning, is…

Machine Learning · Computer Science 2019-10-08 Yu Tian , Long Zhao , Xi Peng , Dimitris N. Metaxas

Many classification problems involve data instances that are interlinked with each other, such as webpages connected by hyperlinks. Techniques for "collective classification" (CC) often increase accuracy for such data graphs, but usually…

Machine Learning · Computer Science 2012-07-03 Luke McDowell , David Aha

We present an analysis of the transductive node classification problem, where the underlying graph consists of communities that agree with the node labels and node features. For node classification, we propose a novel optimization problem…

Machine Learning · Computer Science 2025-08-29 Firooz Shahriari-Mehr , Javad Aliakbari , Alexandre Graell i Amat , Ashkan Panahi

As graph data grows increasingly complicate, training graph neural networks (GNNs) on large-scale datasets presents significant challenges, including computational resource constraints, data redundancy, and transmission inefficiencies.…

Machine Learning · Computer Science 2025-12-05 Liangliang Zhang , Haoran Bao , Yao Ma

Graph neural networks have pushed state-of-the-arts in graph classifications recently. Typically, these methods are studied within the context of supervised end-to-end training, which necessities copious task-specific labels. However, in…

Machine Learning · Computer Science 2023-06-01 Xiao Luo , Yusheng Zhao , Yifang Qin , Wei Ju , Ming Zhang

Graph Convolutional Neural Networks (GCNNs) are generalizations of CNNs to graph-structured data, in which convolution is guided by the graph topology. In many cases where graphs are unavailable, existing methods manually construct graphs…

Machine Learning · Computer Science 2019-09-17 Xiang Gao , Wei Hu , Zongming Guo

Drug repositioning offers an effective solution to drug discovery, saving both time and resources by finding new indications for existing drugs. Typically, a drug takes effect via its protein targets in the cell. As a result, it is…

Quantitative Methods · Quantitative Biology 2018-11-26 Maryam Lotfi Shahreza , Nasser Ghadiri , Seyed Rasul Mossavi , Jaleh Varshosaz , James Green

This paper studies semi-supervised graph classification, a crucial task with a wide range of applications in social network analysis and bioinformatics. Recent works typically adopt graph neural networks to learn graph-level representations…

Machine Learning · Computer Science 2023-04-25 Wei Ju , Xiao Luo , Meng Qu , Yifan Wang , Chong Chen , Minghua Deng , Xian-Sheng Hua , Ming Zhang

This paper initiates formal analysis of a simple, distributed algorithm for community detection on networks. We analyze an algorithm that we call \textsc{Max-LPA}, both in terms of its convergence time and in terms of the "quality" of the…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-10-16 Kishore Kothapalli , Sriram V. Pemmaraju , Vivek Sardeshmukh

In machine learning, one must acquire labels to help supervise a model that will be able to generalize to unseen data. However, the labeling process can be tedious, long, costly, and error-prone. It is often the case that most of our data…

Machine Learning · Computer Science 2020-09-29 Bruno Klaus de Aquino Afonso , Lilian Berton

Graph convolutional networks have been successful in addressing graph-based tasks such as semi-supervised node classification. Existing methods use a network structure defined by the user based on experimentation with fixed number of layers…

Machine Learning · Computer Science 2021-01-21 Negar Heidari , Alexandros Iosifidis

Graph Neural Networks (GNNs) have achieved remarkable success in learning node representations and have shown strong performance in tasks such as node classification. However, recent findings indicate that the presence of noise in…

Machine Learning · Computer Science 2025-07-01 Yancheng Wang , Yingzhen Yang