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In biomedical fields, one named entity may consist of a series of non-adjacent tokens and overlap with other entities. Previous methods recognize discontinuous entities by connecting entity fragments or internal tokens, which face…

Computation and Language · Computer Science 2025-10-14 Yawen Yang , Fukun Ma , Shiao Meng , Aiwei Liu , Lijie Wen

In this paper we investigate the role of the dependency tree in a named entity recognizer upon using a set of GCN. We perform a comparison among different NER architectures and show that the grammar of a sentence positively influences the…

Computation and Language · Computer Science 2018-02-15 A. Cetoli , S. Bragaglia , A. D. O'Harney , M. Sloan

Named entity recognition (NER) aims to identify mentions of named entities in an unstructured text and classify them into predefined named entity classes. While deep learning-based pre-trained language models help to achieve good predictive…

Computation and Language · Computer Science 2023-06-16 Ali Osman Berk Sapci , Oznur Tastan , Reyyan Yeniterzi

Graph Neural Networks (GNNs) have shown promising results in various tasks, among which link prediction is an important one. GNN models usually follow a node-centric message passing procedure that aggregates the neighborhood information to…

Machine Learning · Computer Science 2022-01-17 Baole Ai , Zhou Qin , Wenting Shen , Yong Li

Entity interaction prediction is essential in many important applications such as chemistry, biology, material science, and medical science. The problem becomes quite challenging when each entity is represented by a complex structure,…

Machine Learning · Computer Science 2021-04-13 Hanchen Wang , Defu Lian , Ying Zhang , Lu Qin , Xuemin Lin

Named Entity Recognition (NER) is a critical task in natural language processing, yet it remains particularly challenging for discontinuous entities. The primary difficulty lies in text segmentation, as traditional methods often missegment…

Computation and Language · Computer Science 2026-01-01 Wen-Fang Su , Hsiao-Wei Chou , Wen-Yang Lin

Graph neural networks (GNNs) have been successfully applied to learning representation on graphs in many relational tasks. Recently, researchers study neural architecture search (NAS) to reduce the dependence of human expertise and explore…

Machine Learning · Computer Science 2021-09-06 Shaofei Cai , Liang Li , Xinzhe Han , Zheng-jun Zha , Qingming Huang

Cross-domain NER is a practical yet challenging problem since the data scarcity in the real-world scenario. A common practice is first to learn a NER model in a rich-resource general domain and then adapt the model to specific domains. Due…

Computation and Language · Computer Science 2024-08-09 Junhao Zheng , Haibin Chen , Qianli Ma

It has been shown that named entity recognition (NER) could benefit from incorporating the long-distance structured information captured by dependency trees. We believe this is because both types of features - the contextual information…

Computation and Language · Computer Science 2021-04-13 Lu Xu , Zhanming Jie , Wei Lu , Lidong Bing

Named entity recognition (NER) is one of the best studied tasks in natural language processing. However, most approaches are not capable of handling nested structures which are common in many applications. In this paper we introduce a novel…

Computation and Language · Computer Science 2019-08-12 Joseph Fisher , Andreas Vlachos

Named Entity Recognition (NER) is a fundamental task in Natural Language Processing, concerned with identifying spans of text expressing references to entities. NER research is often focused on flat entities only (flat NER), ignoring the…

Computation and Language · Computer Science 2020-06-16 Juntao Yu , Bernd Bohnet , Massimo Poesio

Named Entity Recognition (NER) is an important subtask of information extraction that seeks to locate and recognise named entities. Despite recent achievements, we still face limitations with correctly detecting and classifying entities,…

Information Retrieval · Computer Science 2017-10-31 Diego Esteves , Rafael Peres , Jens Lehmann , Giulio Napolitano

Two crucial issues for text summarization to generate faithful summaries are to make use of knowledge beyond text and to make use of cross-sentence relations in text. Intuitive ways for the two issues are Knowledge Graph (KG) and Graph…

Computation and Language · Computer Science 2023-12-07 Jingqiang Chen

Graph neural networks (GNNs) are typically applied to static graphs that are assumed to be known upfront. This static input structure is often informed purely by insight of the machine learning practitioner, and might not be optimal for the…

Current State-of-the-Art models in Named Entity Recognition (NER) are neural models with a Conditional Random Field (CRF) as the final network layer, and pre-trained "contextual embeddings". The CRF layer is used to facilitate global…

Computation and Language · Computer Science 2021-03-25 Brian Lester , Daniel Pressel , Amy Hemmeter , Sagnik Ray Choudhury

While named entity recognition (NER) is a key task in natural language processing, most approaches only target flat entities, ignoring nested structures which are common in many scenarios. Most existing nested NER methods traverse all…

Computation and Language · Computer Science 2021-07-21 Huiqiang Jiang , Guoxin Wang , Weile Chen , Chengxi Zhang , Börje F. Karlsson

Text detection in scenes based on deep neural networks have shown promising results. Instead of using word bounding box regression, recent state-of-the-art methods have started focusing on character bounding box and pixel-level prediction.…

Machine Learning · Computer Science 2020-05-26 Mayank Kumar Singh , Sayan Banerjee , Shubhasis Chaudhuri

Recently Graph Neural Network (GNN) has been applied successfully to various NLP tasks that require reasoning, such as multi-hop machine reading comprehension. In this paper, we consider a novel case where reasoning is needed over graphs…

Computation and Language · Computer Science 2020-04-13 Ming Tu , Jing Huang , Xiaodong He , Bowen Zhou

Recent works show that the graph structure of sentences, generated from dependency parsers, has potential for improving event detection. However, they often only leverage the edges (dependencies) between words, and discard the dependency…

Computation and Language · Computer Science 2021-05-06 Sanghamitra Dutta , Liang Ma , Tanay Kumar Saha , Di Lu , Joel Tetreault , Alejandro Jaimes

Although named entity recognition (NER) helps us to extract domain-specific entities from text (e.g., artists in the music domain), it is costly to create a large amount of training data or a structured knowledge base to perform accurate…

Computation and Language · Computer Science 2023-06-07 Kosuke Nishida , Naoki Yoshinaga , Kyosuke Nishida