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Accurate and efficient methods to simulate nonadiabatic and quantum nuclear effects in high-dimensional and dissipative systems are crucial for the prediction of chemical dynamics in condensed phase. To facilitate effective development,…

Graph neural networks (GNNs) are widely applied in graph data modeling. However, existing GNNs are often trained in a task-driven manner that fails to fully capture the intrinsic nature of the graph structure, resulting in sub-optimal node…

Machine Learning · Computer Science 2024-07-17 Zhenhua Huang , Kunhao Li , Shaojie Wang , Zhaohong Jia , Wentao Zhu , Sharad Mehrotra

Graph neural networks are promising architecture for learning and inference with graph-structured data. Yet difficulties in modelling the ``parts'' and their ``interactions'' still persist in terms of graph classification, where graph-level…

Machine Learning · Computer Science 2020-06-30 Kai Zhang , Yaokang Zhu , Jun Wang , Jie Zhang , Hongyuan Zha

The pretrain-transfer paradigm, which underpins the success of large language models (LLMs), has demonstrated the immense power of creating foundation models that learn generalizable representations from vast datasets. However, extending…

Machine Learning · Computer Science 2025-09-30 Yunhao Liang , Pujun Zhang , Yuan Qu , Shaochong Lin , Zuo-jun Max Shen

Large Language Models are increasingly used by students to explore advanced material in computer science, including graph theory. As these tools become integrated into undergraduate and graduate coursework, it is important to understand how…

Artificial Intelligence · Computer Science 2026-02-06 Adithya Kulkarni , Mohna Chakraborty , Jay Bagga

In this paper, we introduce the concept of self-amplifying structures for hypergraphs, positioning it as a key element for understanding propagation and internal reinforcement in complex systems. To quantify this phenomenon, we define the…

Optimization and Control · Mathematics 2025-07-01 Víctor Blanco , Gabriel González , Praful Gagrani

We describe a framework for solving a broad class of infinite-dimensional linear equations, consisting of almost banded operators, which can be used to resepresent linear ordinary differential equations with general boundary conditions. The…

Numerical Analysis · Mathematics 2014-09-22 Sheehan Olver , Alex Townsend

Five new algorithms were proposed in order to optimize well conditioning of structural matrices. Along with decreasing the size and duration of analyses, minimizing analytical errors is a critical factor in the optimal computer analysis of…

Numerical Analysis · Mathematics 2021-09-21 Farzad S. Dizaji , Mehrdad S. Dizaji

The increasing complexity of computing systems places a tremendous burden on optimizing compilers, requiring ever more accurate and aggressive optimizations. Machine learning offers significant benefits for constructing optimization…

Machine Learning · Computer Science 2020-03-25 Chris Cummins , Zacharias V. Fisches , Tal Ben-Nun , Torsten Hoefler , Hugh Leather

Numerous approaches have been explored for graph clustering, including those which optimize a global criteria such as modularity. More recently, Graph Neural Networks (GNNs), which have produced state-of-the-art results in graph analysis…

Social and Information Networks · Computer Science 2023-08-21 Co Tran , Mo Badawy , Tyler McDonnell

Within this work, we consider optimization settings for nonlinear, nonstationary fluid-structure interaction. The problem is formulated in a monolithic fashion using the arbitrary Lagrangian-Eulerian framework to set-up the fluid-structure…

Numerical Analysis · Mathematics 2020-06-29 Thomas Wick , Winnifried Wollner

Vision-Language Models (VLMs) have emerged as versatile solutions for zero-shot question answering (QA) across various domains. However, enabling VLMs to effectively comprehend structured graphs and perform accurate, efficient QA remains…

Computer Vision and Pattern Recognition · Computer Science 2026-02-26 Yanbin Wei , Jiangyue Yan , Chun Kang , Yang Chen , Hua Liu , James Kwok , Yu Zhang

Here we present a machine learning framework and model implementation that can learn to simulate a wide variety of challenging physical domains, involving fluids, rigid solids, and deformable materials interacting with one another. Our…

Machine Learning · Computer Science 2020-09-15 Alvaro Sanchez-Gonzalez , Jonathan Godwin , Tobias Pfaff , Rex Ying , Jure Leskovec , Peter W. Battaglia

Many real-world optimization models contain exploitable sparsity and block structure, but this structure is often obscured in algebraic form, limiting the effectiveness of modern parallel algorithms. We propose an automatic pipeline that…

Optimization and Control · Mathematics 2026-03-23 Kaizhao Sun , Baihao Wu , Kun Yuan , Wotao Yin

Graph Augmentation Learning (GAL) provides outstanding solutions for graph learning in handling incomplete data, noise data, etc. Numerous GAL methods have been proposed for graph-based applications such as social network analysis and…

Machine Learning · Computer Science 2022-03-18 Shuo Yu , Huafei Huang , Minh N. Dao , Feng Xia

In graph modification problems, one is given a graph G and the goal is to apply a minimum number of modification operations (such as edge deletions) to G such that the resulting graph fulfills a certain property. For example, the Cluster…

Data Structures and Algorithms · Computer Science 2016-06-13 Christian Komusiewicz , André Nichterlein , Rolf Niedermeier

GomalizingFlow.jl: is a package to generate configurations for quantum field theory on the lattice using the flow based sampling algorithm in Julia programming language. This software serves two main purposes: to accelerate research of…

High Energy Physics - Lattice · Physics 2023-10-05 Akio Tomiya , Satoshi Terasaki

In this paper, we provide an affirmative answer to the long-standing question: Are GPUs useful in solving linear programming? We present cuPDLP.jl, a GPU implementation of restarted primal-dual hybrid gradient (PDHG) for solving linear…

Optimization and Control · Mathematics 2024-06-10 Haihao Lu , Jinwen Yang

Joint network topology inference represents a canonical problem of jointly learning multiple graph Laplacian matrices from heterogeneous graph signals. In such a problem, a widely employed assumption is that of a simple common component…

Statistics Theory · Mathematics 2021-07-09 Yanli Yuan , De Wen Soh , Xiao Yang , Kun Guo , Tony Q. S. Quek

To mitigate the suboptimal nature of graph structure, Graph Structure Learning (GSL) has emerged as a promising approach to improve graph structure and boost performance in downstream tasks. Despite the proposal of numerous GSL methods, the…

Machine Learning · Computer Science 2024-06-14 Zhiyao Zhou , Sheng Zhou , Bochao Mao , Jiawei Chen , Qingyun Sun , Yan Feng , Chun Chen , Can Wang
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