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This paper proposes a data-driven approximate Bayesian computation framework for parameter estimation and uncertainty quantification of epidemic models, which incorporates two novelties: (i) the identification of the initial conditions by…

Applications · Statistics 2023-06-28 Americo Cunha , David A. W. Barton , Thiago G. Ritto

This manuscript proposes a model of $n$ distinct populations interaction structured SEIR to describe the spread of COVID-19 pandemic diseases. The proposed model has the flexibility to include geographically separated communities as well as…

Populations and Evolution · Quantitative Biology 2020-08-04 Matheus Jatkoske Lazo , Adriano De Cezaro

This paper provides a comprehensive survey of recent advancements in leveraging machine learning techniques, particularly Transformer models, for predicting human mobility patterns during epidemics. Understanding how people move during…

This work aims at unveiling the potential of Transfer Learning (TL) for developing a traffic flow forecasting model in scenarios of absent data. Knowledge transfer from high-quality predictive models becomes feasible under the TL paradigm,…

Machine Learning · Computer Science 2020-05-12 Eric L. Manibardo , Ibai Laña , Javier Del Ser

The novel coronavirus disease (COVID-19) is a public health problem once according to the World Health Organization up to June 10th, 2020, more than 7.1 million people were infected, and more than 400 thousand have died worldwide. In the…

Populations and Evolution · Quantitative Biology 2020-07-22 Ramon Gomes da Silva , Matheus Henrique Dal Molin Ribeiro , Viviana Cocco Mariani , Leandro dos Santos Coelho

The effective control of infectious diseases relies on accurate assessment of the impact of interventions, which is often hindered by the complex dynamics of the spread of disease. A Beta-Dirichlet switching state-space transmission model…

Methodology · Statistics 2024-04-30 Jingxue Feng , Liangliang Wang

In networks of independent entities that face similar predictive tasks, transfer machine learning enables to re-use and improve neural nets using distributed data sets without the exposure of raw data. As the number of data sets in business…

Machine Learning · Computer Science 2020-03-31 Robin Hirt , Akash Srivastava , Carlos Berg , Niklas Kühl

To infer a diffusion network based on observations from historical diffusion processes, existing approaches assume that observation data contain exact occurrence time of each node infection, or at least the eventual infection statuses of…

Social and Information Networks · Computer Science 2023-12-14 Hao Huang , Qian Yan , Keqi Han , Ting Gan , Jiawei Jiang , Quanqing Xu , Chuanhui Yan

Predicting the spread of vector-borne diseases in response to incursions requires knowledge of both host and vector demographics in advance of an outbreak. Whereas host population data is typically available, for novel disease introductions…

Populations and Evolution · Quantitative Biology 2015-06-02 Chris Jewell , Richard Brown

Early and precise diagnosis of diseases in plants can help to develop an early treatment technique. Plant diseases degrade both the quantity and quality of crops, thus posing a threat to food security and resulting in huge economic losses.…

Image and Video Processing · Electrical Eng. & Systems 2022-08-17 Bhavya Jain , Sasikumar Periyasamy

Infectious disease forecasting is of great interest to the public health community and policymakers, since forecasts can provide insight into disease dynamics in the near future and inform interventions. Due to delays in case reporting,…

Methodology · Statistics 2022-10-12 Lauren J Beesley , Dave Osthus , Sara Y Del Valle

Recent outbreaks of monkeypox and Ebola, and worrying waves of COVID-19, influenza and respiratory syncytial virus, have all led to a sharp increase in the use of epidemiological models to estimate key epidemiological parameters. The…

Populations and Evolution · Quantitative Biology 2023-12-01 B. K. M. Case , Jean-Gabriel Young , Laurent Hébert-Dufresne

We investigate how the properties of epidemic networks change depending on the availability of different types of data on a disease outbreak. This is achieved by introducing mathematical and computational methods that estimate the…

Computational Physics · Physics 2025-09-03 Oscar Fajardo-Fontiveros , Carl J. E. Suster , Eduardo G. Altmann

Health-policy planning requires evidence on the burden that epidemics place on healthcare systems. Multiple, often dependent, datasets provide a noisy and fragmented signal from the unobserved epidemic process including transmission and…

Applications · Statistics 2024-09-11 Alice Corbella , Anne M Presanis , Paul J Birrell , Daniela De Angelis

Interaction-driven modeling of diseases over real-world contact data has been shown to promote the understanding of the spread of diseases in communities. This temporal modeling follows the path-preserving order and timing of the contacts,…

Applications · Statistics 2023-07-13 Yanir Marmor , Alex Abbey , Yuval Shahar , Osnat Mokryn

In recent years, supervised machine learning models have demonstrated tremendous success in a variety of application domains. Despite the promising results, these successful models are data hungry and their performance relies heavily on the…

Machine Learning · Computer Science 2018-12-05 Azin Asgarian , Parinaz Sobhani , Ji Chao Zhang , Madalin Mihailescu , Ariel Sibilia , Ahmed Bilal Ashraf , Babak Taati

Compartmental models are widely adopted to describe and predict the spreading of infectious diseases. The unknown parameters of such models need to be estimated from the data. Furthermore, when some of the model variables are not…

Physics and Society · Physics 2021-01-18 Luca Gallo , Mattia Frasca , Vito Latora , Giovanni Russo

The recent development of Monkeypox disease among various nations poses a global pandemic threat when the world is still fighting Coronavirus Disease-2019 (COVID-19). At its dawn, the slow and steady transmission of Monkeypox disease among…

Image and Video Processing · Electrical Eng. & Systems 2022-11-16 Md Manjurul Ahsan , Tareque Abu Abdullah , Md Shahin Ali , Fatematuj Jahora , Md Khairul Islam , Amin G. Alhashim , Kishor Datta Gupta

Infectious disease modeling and forecasting have played a key role in helping assess and respond to epidemics and pandemics. Recent work has leveraged data on disease peak infection and peak hospital incidence to fit compartmental models…

Zika virus (ZIKV), a disease spread primarily through the Aedes aegypti mosquito, was identified in Brazil in 2015 and was declared a global health emergency by the World Health Organization (WHO). Epidemiologists often use common…

Populations and Evolution · Quantitative Biology 2017-01-27 Derek Lo , Briton Park