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AI agents have seen widespread adoption in information retrieval for scientific research, giving rise to tools such as Deep Research. However, existing retrieval agents mainly rely on keyword- or embedding-based methods. While effective at…

Computational Engineering, Finance, and Science · Computer Science 2026-05-25 Chenyang Shao , Fengli Xu , Yong Li

Systematic comparison of methods for relation extraction (RE) is difficult because many experiments in the field are not described precisely enough to be completely reproducible and many papers fail to report ablation studies that would…

Computation and Language · Computer Science 2021-07-14 Geeticka Chauhan , Matthew B. A. McDermott , Peter Szolovits

We propose a knowledge-based approach for extraction of Cause-Effect (CE) relations from biomedical text. Our approach is a combination of an unsupervised machine learning technique to discover causal triggers and a set of high-precision…

Computation and Language · Computer Science 2021-03-11 Sachin Pawar , Ravina More , Girish K. Palshikar , Pushpak Bhattacharyya , Vasudeva Varma

Zero-shot relation triplet extraction (ZeroRTE) aims to extract relation triplets from unstructured texts under the zero-shot setting, where the relation sets at the training and testing stages are disjoint. Previous state-of-the-art method…

Computation and Language · Computer Science 2022-12-14 Yuquan Lan , Dongxu Li , Yunqi Zhang , Hui Zhao , Gang Zhao

State-of-the-art deep learning entity linking methods rely on extensive human-labelled data, which is costly to acquire. Current datasets are limited in size, leading to inadequate coverage of biomedical concepts and diminished performance…

Computation and Language · Computer Science 2024-10-23 Pedro Ruas , Fernando Gallego , Francisco J. Veredas , Francisco M. Couto

Relation Extraction (RE) is a pivotal task in automatically extracting structured information from unstructured text. In this paper, we present a multi-faceted approach that integrates representative examples and through co-set expansion.…

Computation and Language · Computer Science 2023-08-24 Yerong Li , Roxana Girju

Document-level relation extraction (RE) aims to extract the relations between entities from the input document that usually containing many difficultly-predicted entity pairs whose relations can only be predicted through relational…

Computation and Language · Computer Science 2022-11-29 Liang Zhang , Jinsong Su , Yidong Chen , Zhongjian Miao , Zijun Min , Qingguo Hu , Xiaodong Shi

Sentence-level relation extraction (RE) aims to identify the relationship between 2 entities given a contextual sentence. While there have been many attempts to solve this problem, the current solutions have a lot of room to improve. In…

Computation and Language · Computer Science 2023-07-04 N Harsha Vardhan , Manav Chaudhary

Compared to the general news domain, information extraction (IE) from biomedical text requires much broader domain knowledge. However, many previous IE methods do not utilize any external knowledge during inference. Due to the exponential…

Computation and Language · Computer Science 2021-06-02 Tuan Lai , Heng Ji , ChengXiang Zhai , Quan Hung Tran

Relation extraction (RE) aims to extract the relations between entity names from the textual context. In principle, textual context determines the ground-truth relation and the RE models should be able to correctly identify the relations…

Computation and Language · Computer Science 2024-05-08 Yiwei Wang , Bryan Hooi , Fei Wang , Yujun Cai , Yuxuan Liang , Wenxuan Zhou , Jing Tang , Manjuan Duan , Muhao Chen

Extracting information from full documents is an important problem in many domains, but most previous work focus on identifying relationships within a sentence or a paragraph. It is challenging to create a large-scale information extraction…

Computation and Language · Computer Science 2020-05-04 Sarthak Jain , Madeleine van Zuylen , Hannaneh Hajishirzi , Iz Beltagy

Relation extraction (RE) aims to identify the semantic relations between named entities in text. Recent years have witnessed it raised to the document level, which requires complex reasoning with entities and mentions throughout an entire…

Computation and Language · Computer Science 2020-09-23 Difeng Wang , Wei Hu , Ermei Cao , Weijian Sun

We study the problem of extracting N-ary relation tuples from scientific articles. This task is challenging because the target knowledge tuples can reside in multiple parts and modalities of the document. Our proposed method ReSel…

Computation and Language · Computer Science 2022-10-27 Yuchen Zhuang , Yinghao Li , Jerry Junyang Cheung , Yue Yu , Yingjun Mou , Xiang Chen , Le Song , Chao Zhang

Named entity recognition (NER) and relation extraction (RE) are two important tasks in information extraction and retrieval (IE \& IR). Recent work has demonstrated that it is beneficial to learn these tasks jointly, which avoids the…

Computation and Language · Computer Science 2020-01-01 John Giorgi , Xindi Wang , Nicola Sahar , Won Young Shin , Gary D. Bader , Bo Wang

Relational facts are an important component of human knowledge, which are hidden in vast amounts of text. In order to extract these facts from text, people have been working on relation extraction (RE) for years. From early pattern matching…

Computation and Language · Computer Science 2020-10-01 Xu Han , Tianyu Gao , Yankai Lin , Hao Peng , Yaoliang Yang , Chaojun Xiao , Zhiyuan Liu , Peng Li , Maosong Sun , Jie Zhou

Relation extraction (RE) seeks to detect and classify semantic relationships between entities, which provides useful information for many NLP applications. Since the state-of-the-art RE models require large amounts of manually annotated…

Computation and Language · Computer Science 2019-11-13 Jian Ni , Radu Florian

Scientific literature contains a considerable amount of information that provides an excellent opportunity for developing text mining methods to extract biomedical relationships. An important type of information is the relationship between…

Computation and Language · Computer Science 2023-08-08 Mohammad Dehghani , Behrouz Bokharaeian , Zahra Yazdanparast

Document-level relation extraction aims to categorize the association between any two entities within a document. We find that previous methods for document-level relation extraction are ineffective in exploiting the full potential of large…

Computation and Language · Computer Science 2024-06-11 Chufan Gao , Xuan Wang , Jimeng Sun

Relation extraction (RE) is a standard information extraction task playing a major role in downstream applications such as knowledge discovery and question answering. Although decoder-only large language models are excelling in generative…

Computation and Language · Computer Science 2025-07-28 Yuhang Jiang , Ramakanth Kavuluru

Document-level relation extraction (DocRE) aims to extract semantic relations among entity pairs in a document. Typical DocRE methods blindly take the full document as input, while a subset of the sentences in the document, noted as the…

Computation and Language · Computer Science 2022-03-08 Yiqing Xie , Jiaming Shen , Sha Li , Yuning Mao , Jiawei Han
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