English
Related papers

Related papers: RuBioRoBERTa: a pre-trained biomedical language mo…

200 papers

Biomedical Named Entity Recognition (NER) is a fundamental task of Biomedical Natural Language Processing for extracting relevant information from biomedical texts, such as clinical records, scientific publications, and electronic health…

Computation and Language · Computer Science 2023-12-27 Fahime Shahrokh , Nasser Ghadiri , Rasoul Samani , Milad Moradi

The availability of biomedical text data and advances in natural language processing (NLP) have made new applications in biomedical NLP possible. Language models trained or fine tuned using domain specific corpora can outperform general…

Computation and Language · Computer Science 2021-07-12 Usman Naseem , Adam G. Dunn , Matloob Khushi , Jinman Kim

Knowledge of a disease includes information of various aspects of the disease, such as signs and symptoms, diagnosis and treatment. This disease knowledge is critical for many health-related and biomedical tasks, including consumer health…

Computation and Language · Computer Science 2020-10-09 Yun He , Ziwei Zhu , Yin Zhang , Qin Chen , James Caverlee

Language model pre-training has proven to be useful in learning universal language representations. As a state-of-the-art language model pre-training model, BERT (Bidirectional Encoder Representations from Transformers) has achieved amazing…

Computation and Language · Computer Science 2020-02-06 Chi Sun , Xipeng Qiu , Yige Xu , Xuanjing Huang

The utilization of clinical reports for various secondary purposes, including health research and treatment monitoring, is crucial for enhancing patient care. Natural Language Processing (NLP) tools have emerged as valuable assets for…

Computation and Language · Computer Science 2023-06-14 Iker de la Iglesia , Aitziber Atutxa , Koldo Gojenola , Ander Barrena

Clinical data in hospitals are increasingly accessible for research through clinical data warehouses. However these documents are unstructured and it is therefore necessary to extract information from medical reports to conduct clinical…

Computation and Language · Computer Science 2024-04-04 Rian Touchent , Laurent Romary , Eric de la Clergerie

Pre-trained models are widely used in the tasks of natural language processing nowadays. However, in the specific field of text simplification, the research on improving pre-trained models is still blank. In this work, we propose a…

Computation and Language · Computer Science 2022-04-19 Renliang Sun , Xiaojun Wan

An overwhelmingly large amount of knowledge in the materials domain is generated and stored as text published in peer-reviewed scientific literature. Recent developments in natural language processing, such as bidirectional encoder…

Computation and Language · Computer Science 2021-10-01 Tanishq Gupta , Mohd Zaki , N. M. Anoop Krishnan , Mausam

Healthcare predictive analytics aids medical decision-making, diagnosis prediction and drug review analysis. Therefore, prediction accuracy is an important criteria which also necessitates robust predictive language models. However, the…

Computation and Language · Computer Science 2021-04-06 Ishani Mondal

The increasing amount of political debates and politics-related discussions calls for the definition of novel computational methods to automatically analyse such content with the final goal of lightening up political deliberation to…

Computation and Language · Computer Science 2026-02-25 Deborah Dore , Elena Cabrio , Serena Villata

Despite of the superb performance on a wide range of tasks, pre-trained language models (e.g., BERT) have been proved vulnerable to adversarial texts. In this paper, we present RoChBERT, a framework to build more Robust BERT-based models by…

Computation and Language · Computer Science 2022-10-31 Zihan Zhang , Jinfeng Li , Ning Shi , Bo Yuan , Xiangyu Liu , Rong Zhang , Hui Xue , Donghong Sun , Chao Zhang

Large-scale pretrained language models have become ubiquitous in Natural Language Processing. However, most of these models are available either in high-resource languages, in particular English, or as multilingual models that compromise…

Computation and Language · Computer Science 2020-09-21 Stefan Daniel Dumitrescu , Andrei-Marius Avram , Sampo Pyysalo

This paper describes the training process of the first Czech monolingual language representation models based on BERT and ALBERT architectures. We pre-train our models on more than 340K of sentences, which is 50 times more than multilingual…

Computation and Language · Computer Science 2021-08-23 Jakub Sido , Ondřej Pražák , Pavel Přibáň , Jan Pašek , Michal Seják , Miloslav Konopík

Recent years have witnessed the burgeoning of pretrained language models (LMs) for text-based natural language (NL) understanding tasks. Such models are typically trained on free-form NL text, hence may not be suitable for tasks like…

Computation and Language · Computer Science 2020-05-19 Pengcheng Yin , Graham Neubig , Wen-tau Yih , Sebastian Riedel

Biomedical entity linking, a main component in automatic information extraction from health-related texts, plays a pivotal role in connecting textual entities (such as diseases, drugs and body parts mentioned by patients) to their…

Computation and Language · Computer Science 2024-05-21 Fons Hartendorp , Tom Seinen , Erik van Mulligen , Suzan Verberne

This article investigates the knowledge transfer from the RuQTopics dataset. This Russian topical dataset combines a large sample number (361,560 single-label, 170,930 multi-label) with extensive class coverage (76 classes). We have…

Computation and Language · Computer Science 2023-07-06 Dmitry Karpov , Mikhail Burtsev

Background: Identifying relationships between clinical events and temporal expressions is a key challenge in meaningfully analyzing clinical text for use in advanced AI applications. While previous studies exist, the state-of-the-art…

Computation and Language · Computer Science 2020-04-15 Hong Guan , Jianfu Li , Hua Xu , Murthy Devarakonda

Transformer-based language models, more specifically BERT-based architectures have achieved state-of-the-art performance in many downstream tasks. However, for a relatively low-resource language such as Thai, the choices of models are…

Computation and Language · Computer Science 2021-03-23 Lalita Lowphansirikul , Charin Polpanumas , Nawat Jantrakulchai , Sarana Nutanong

BERT-based models are currently used for solving nearly all Natural Language Processing (NLP) tasks and most often achieve state-of-the-art results. Therefore, the NLP community conducts extensive research on understanding these models, but…

Computation and Language · Computer Science 2021-05-06 Robert Mroczkowski , Piotr Rybak , Alina Wróblewska , Ireneusz Gawlik

The delivery of appropriate targeted therapies to cancer patients requires the complete analysis of the molecular profiling of tumors and the patient's clinical characteristics in the context of existing knowledge and recent findings…

Computation and Language · Computer Science 2024-12-13 Ting He , Kory Kreimeyer , Mimi Najjar , Jonathan Spiker , Maria Fatteh , Valsamo Anagnostou , Taxiarchis Botsis