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This paper presents new results about the optimization based generation of chemical reaction networks (CRNs) of higher deficiency. Firstly, it is shown that the graph structure of the realization containing the maximal number of reactions…

Molecular Networks · Quantitative Biology 2011-03-23 Gabor Szederkenyi , Katalin M. Hangos , Tamas Peni

In the past two decades, machine learning potentials (MLP) have reached a level of maturity that now enables applications to large-scale atomistic simulations of a wide range of systems in chemistry, physics and materials science. Different…

Chemical Physics · Physics 2021-07-09 Emir Kocer , Tsz Wai Ko , Jörg Behler

Currently, increasingly deeper neural networks have been applied to improve their accuracy. In contrast, We propose a novel wider Convolutional Neural Networks (CNN) architecture, motivated by the Multi-column Deep Neural Networks and the…

Computer Vision and Pattern Recognition · Computer Science 2018-10-10 Xiaobo Huang

Optical Character Recognition software (OCR) are important tools for obtaining accessible texts. We propose the use of artificial neural networks (ANN) in order to develop pattern recognition algorithms capable of recognizing both normal…

Neural and Evolutionary Computing · Computer Science 2016-07-08 Giuseppe Airò Farulla , Tiziana Armano , Anna Capietto , Nadir Murru , Rosaria Rossini

Recurrent neural networks are a powerful means to cope with time series. We show how autoregressive linear, i.e., linearly activated recurrent neural networks (LRNNs) can approximate any time-dependent function f(t). The approximation can…

Machine Learning · Computer Science 2025-10-01 Frieder Stolzenburg , Sandra Litz , Olivia Michael , Oliver Obst

This paper introduces an adaptive convolutional neural network (CNN) architecture capable of automating various topology optimization (TO) problems with diverse underlying physics. The proposed architecture has an encoder-decoder-type…

Computational Engineering, Finance, and Science · Computer Science 2024-04-19 Khaish Singh Chadha , Prabhat Kumar

Here we address the challenge of profiling causal properties and tracking the transformation of chemical compounds from an algorithmic perspective. We explore the potential of applying a computational interventional calculus based on the…

Molecular Networks · Quantitative Biology 2018-03-20 Hector Zenil , Narsis A. Kiani , Ming-Mei Shang , Jesper Tegnér

The scope of this teaching package is to make a brief induction to Artificial Neural Networks (ANNs) for people who have no previous knowledge of them. We first make a brief introduction to models of networks, for then describing in general…

Neural and Evolutionary Computing · Computer Science 2007-05-23 Carlos Gershenson

We propose an adaptive sampling method for the training of Physics Informed Neural Networks (PINNs) which allows for sampling based on an arbitrary problem-specific heuristic which may depend on the network and its gradients. In particular…

Numerical Analysis · Mathematics 2026-04-08 Kevin Buck , Woojeong Kim

Artificial Neural Networks (ANN) have been popularized in many science and technological areas due to their capacity to solve many complex pattern matching problems. That is the case of Virtual Screening, a research area that studies how to…

Neural and Evolutionary Computing · Computer Science 2020-06-05 Christian F. Frasser , Carola de Benito , Vincent Canals , Miquel Roca , Pedro J. Ballester , Josep L. Rossello

A convolutional layer in a Convolutional Neural Network (CNN) consists of many filters which apply convolution operation to the input, capture some special patterns and pass the result to the next layer. If the same patterns also occur at…

Computer Vision and Pattern Recognition · Computer Science 2019-02-04 Okan Köpüklü , Maryam Babaee , Stefan Hörmann , Gerhard Rigoll

Layer-wise relevance propagation (LRP) is a recently proposed technique for explaining predictions of complex non-linear classifiers in terms of input variables. In this paper, we apply LRP for the first time to natural language processing…

Computation and Language · Computer Science 2016-06-24 Leila Arras , Franziska Horn , Grégoire Montavon , Klaus-Robert Müller , Wojciech Samek

Randomized neural network (RaNN) methods have been proposed for solving various partial differential equations (PDEs), demonstrating high accuracy and efficiency. However, initializing the fixed parameters remains challenging. Additionally,…

Numerical Analysis · Mathematics 2025-11-25 Haoning Dang , Fei Wang , Song Jiang

With the rise of deep neural networks for quantum chemistry applications, there is a pressing need for architectures that, beyond delivering accurate predictions of chemical properties, are readily interpretable by researchers. Here, we…

Computational Physics · Physics 2018-06-28 Kristof T. Schütt , Michael Gastegger , Alexandre Tkatchenko , Klaus-Robert Müller

We derive the nonequilibrium conductance matrix for open stationary Chemical Reaction Networks (CRNs) described by a deterministic mass action kinetic equation. As an illustration, we determine the nonequilibrium conductance matrix of a CRN…

Statistical Mechanics · Physics 2025-06-27 Paul Raux , Christophe Goupil , Gatien Verley

Deep Neural networks are efficient and flexible models that perform well for a variety of tasks such as image, speech recognition and natural language understanding. In particular, convolutional neural networks (CNN) generate a keen…

Machine Learning · Computer Science 2018-12-20 Yesmina Jaafra , Jean Luc Laurent , Aline Deruyver , Mohamed Saber Naceur

A chemical reaction network (CRN) is composed of reactions that can be seen as interactions among entities called species, which exist within the system. Endowed with kinetics, CRN has a corresponding set of ordinary differential equations…

Dynamical Systems · Mathematics 2021-04-20 Bryan S. Hernandez , Ralph John L. De la Cruz

There is an increasing interest in applying deep learning to 3D mesh segmentation. We observe that 1) existing feature-based techniques are often slow or sensitive to feature resizing, 2) there are minimal comparative studies and 3)…

Graphics · Computer Science 2018-02-09 David George , Xianghua Xie , Gary KL Tam

We recently proposed a convolutional neural network (CNN) for remote sensing image pansharpening obtaining a significant performance gain over the state of the art. In this paper, we explore a number of architectural and training variations…

Computer Vision and Pattern Recognition · Computer Science 2018-10-09 Giuseppe Scarpa , Sergio Vitale , Davide Cozzolino

Artificial Intelligence (AI) and Machine Learning (ML) are weaving their way into the fabric of society, where they are playing a crucial role in numerous facets of our lives. As we witness the increased deployment of AI and ML in various…

Emerging Technologies · Computer Science 2022-12-23 Sasitharan Balasubramaniam , Samitha Somathilaka , Sehee Sun , Adrian Ratwatte , Massimiliano Pierobon
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