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Accurate molecular property prediction is a critical challenge with wide-ranging applications in chemistry, materials science, and drug discovery. Molecular representation methods, including fingerprints and graph neural networks (GNNs),…

Machine Learning · Computer Science 2025-08-13 Jiaxin Ju , Yizhen Zheng , Huan Yee Koh , Can Wang , Shirui Pan

Markov logic networks (MLNs) reconcile two opposing schools in machine learning and artificial intelligence: causal networks, which account for uncertainty extremely well, and first-order logic, which allows for formal deduction. An MLN is…

Machine Learning · Statistics 2017-04-20 Peter Wittek , Christian Gogolin

Semi-supervised learning (SSL) has attracted enormous attention due to its vast potential of mitigating the dependence on large labeled datasets. The latest methods (e.g., FixMatch) use a combination of consistency regularization and…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 Yuhao Chen , Xin Tan , Borui Zhao , Zhaowei Chen , Renjie Song , Jiajun Liang , Xuequan Lu

Although machine learning has been successfully used to propose novel molecules that satisfy desired properties, it is still challenging to explore a large chemical space efficiently. In this paper, we present a conditional molecular design…

Machine Learning · Computer Science 2019-04-02 Seokho Kang , Kyunghyun Cho

Existing semi-supervised medical segmentation co-learning frameworks have realized that model performance can be diminished by the biases in model recognition caused by low-quality pseudo-labels. Due to the averaging nature of their…

Image and Video Processing · Electrical Eng. & Systems 2025-05-20 Yuanpeng He , Yali Bi , Lijian Li , Chi-Man Pun , Wenpin Jiao , Zhi Jin

Domain adaptation aims to mitigate the domain gap when transferring knowledge from an existing labeled domain to a new domain. However, existing disentanglement-based methods do not fully consider separation between domain-invariant and…

Computer Vision and Pattern Recognition · Computer Science 2021-06-23 Youshan Zhang , Brian D. Davison

Support Vector Machines (SVMs) are well-established Machine Learning (ML) algorithms. They rely on the fact that i) linear learning can be formalized as a well-posed optimization problem; ii) non-linear learning can be brought into linear…

Artificial Intelligence · Computer Science 2016-08-16 Christian Gagné , Marc Schoenauer , Michèle Sebag , Marco Tomassini

Since the advent of machine learning, interpretability has remained a persistent challenge, becoming increasingly urgent as generative models support high-stakes applications in drug and material discovery. Recent advances in large language…

Machine Learning · Computer Science 2025-12-10 Jaron Cohen , Alexander G. Hasson , Sara Tanovic

Recent years have witnessed the success of dictionary learning (DL) based approaches in the domain of pattern classification. In this paper, we present an efficient structured dictionary learning (ESDL) method which takes both the diversity…

Computer Vision and Pattern Recognition · Computer Science 2020-07-15 Zi-Qi Li , Jun Sun , Xiao-Jun Wu , He-Feng Yin

Recent advancements in generative models have established state-of-the-art benchmarks in the generation of molecules and novel drug candidates. Despite these successes, a significant gap persists between generative models and the…

Machine Learning · Computer Science 2024-10-10 Aditya Malusare , Vaneet Aggarwal

Understanding whether fine-tuning elicits latent capabilities or teaches new ones is a fundamental question for language model evaluation and safety. We develop a formal information-theoretic framework for quantifying how much predictive…

Machine Learning · Computer Science 2026-01-09 Elizabeth Donoway , Hailey Joren , Fabien Roger , Jan Leike

Molecular property prediction and generative design via deep learning models has been the subject of intense research given its potential to accelerate development of new, high-performance materials. More recently, these workflows have been…

Artificial Intelligence · Computer Science 2024-12-16 Nathaniel H. Park , Tiffany J. Callahan , James L. Hedrick , Tim Erdmann , Sara Capponi

Continual learning in computer vision faces the critical challenge of catastrophic forgetting, where models struggle to retain prior knowledge while adapting to new tasks. Although recent studies have attempted to leverage the…

Computer Vision and Pattern Recognition · Computer Science 2025-03-25 Xusheng Cao , Haori Lu , Linlan Huang , Fei Yang , Xialei Liu , Ming-Ming Cheng

Recurrent neural networks (RNNs) have led to breakthroughs in natural language processing and speech recognition, wherein hundreds of millions of people use such tools on a daily basis through smartphones, email servers and other avenues.…

Disordered Systems and Neural Networks · Physics 2020-12-02 Sun-Ting Tsai , En-Jui Kuo , Pratyush Tiwary

Incremental learning of semantic segmentation has emerged as a promising strategy for visual scene interpretation in the open- world setting. However, it remains challenging to acquire novel classes in an online fashion for the segmentation…

Computer Vision and Pattern Recognition · Computer Science 2021-08-10 Shipeng Yan , Jiale Zhou , Jiangwei Xie , Songyang Zhang , Xuming He

Amidst the sharp rise in the evaluation of large language models (LLMs) on various tasks, we find that semantic textual similarity (STS) has been under-explored. In this study, we show that STS can be cast as a text generation problem while…

Computation and Language · Computer Science 2023-09-14 Joseph Gatto , Omar Sharif , Parker Seegmiller , Philip Bohlman , Sarah Masud Preum

Deep generative modeling to stochastically design small molecules is an emerging technology for accelerating drug discovery and development. However, one major issue in molecular generative models is their lower frequency of drug-like…

Recent years have seen a rapid growth of utilizing graph neural networks (GNNs) in the biomedical domain for tackling drug-related problems. However, like any other deep architectures, GNNs are data hungry. While requiring labels in real…

Biological Physics · Physics 2022-05-03 Mengying Sun , Jing Xing , Huijun Wang , Bin Chen , Jiayu Zhou

De novo generation of hit-like molecules is a challenging task in the drug discovery process. Most methods in previous studies learn the semantics and syntax of molecular structures by analyzing molecular graphs or simplified molecular…

Machine Learning · Computer Science 2025-04-18 Chen Li , Yoshihiro Yamanishi

Graph Neural Networks (GNNs) have been widely employed for feature representation learning in molecular graphs. Therefore, it is crucial to enhance the expressiveness of feature representation to ensure the effectiveness of GNNs. However, a…

Machine Learning · Computer Science 2024-09-16 Chengyu Yao , Hong Huang , Hang Gao , Fengge Wu , Haiming Chen , Junsuo Zhao
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