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Object segmentation and structure localization are important steps in automated image analysis pipelines for microscopy images. We present a convolution neural network (CNN) based deep learning architecture for segmentation of objects in…

Computer Vision and Pattern Recognition · Computer Science 2019-01-24 Shan E Ahmed Raza , Linda Cheung , Muhammad Shaban , Simon Graham , David Epstein , Stella Pelengaris , Michael Khan , Nasir M. Rajpoot

In unmanned aerial systems, especially in complex environments, accurately detecting tiny objects is crucial. Resizing images is a common strategy to improve detection accuracy, particularly for small objects. However, simply enlarging…

Computer Vision and Pattern Recognition · Computer Science 2025-05-06 Luqi Gong , Haotian Chen , Yikun Chen , Tianliang Yao , Chao Li , Shuai Zhao , Guangjie Han

Accurate identification and precise delineation of regions of significance, such as tumors or lesions, is a pivotal goal in medical imaging analysis. This paper proposes SPEEDNet, a novel architecture for precisely segmenting lesions within…

Image and Video Processing · Electrical Eng. & Systems 2023-12-05 Tushir Sahu , Vidhi Bhatt , Sai Chandra Teja R , Sparsh Mittal , Nagesh Kumar S

Downsampling images and labels, often necessitated by limited resources or to expedite network training, leads to the loss of small objects and thin boundaries. This undermines the segmentation network's capacity to interpret images…

Image and Video Processing · Electrical Eng. & Systems 2024-10-27 Shahzad Ali , Yu Rim Lee , Soo Young Park , Won Young Tak , Soon Ki Jung

In some important computer vision domains, such as medical or hyperspectral imaging, we care about the classification of tiny objects in large images. However, most Convolutional Neural Networks (CNNs) for image classification were…

Computer Vision and Pattern Recognition · Computer Science 2020-01-07 Nick Pawlowski , Suvrat Bhooshan , Nicolas Ballas , Francesco Ciompi , Ben Glocker , Michal Drozdzal

Convolutional neural networks (CNN) have achieved state of the art performance on both classification and segmentation tasks. Applying CNNs to microscopy images is challenging due to the lack of datasets labeled at the single cell level. We…

Computer Vision and Pattern Recognition · Computer Science 2017-05-25 Oren Z. Kraus , Lei Jimmy Ba , Brendan Frey

Cell counting is a ubiquitous, yet tedious task that would greatly benefit from automation. From basic biological questions to clinical trials, cell counts provide key quantitative feedback that drive research. Unfortunately, cell counting…

Computer Vision and Pattern Recognition · Computer Science 2018-03-02 Carlos X. Hernández , Mohammad M. Sultan , Vijay S. Pande

To accelerate deep CNN models, this paper proposes a novel spatially adaptive framework that can dynamically generate pixel-wise sparsity according to the input image. The sparse scheme is pixel-wise refined, regional adaptive under a…

Computer Vision and Pattern Recognition · Computer Science 2021-03-23 Chen Tang , Wenyu Sun , Zhuqing Yuan , Yongpan Liu

Deep Convolutional Neural Networks (CNNs) for image classification successively alternate convolutions and downsampling operations, such as pooling layers or strided convolutions, resulting in lower resolution features the deeper the…

Computer Vision and Pattern Recognition · Computer Science 2022-09-29 Ioannis Vezakis , Antonios Vezakis , Sofia Gourtsoyianni , Vassilis Koutoulidis , George K. Matsopoulos , Dimitrios Koutsouris

In convolutional neural networks (CNNs), downsampling operations are crucial to model performance. Although traditional downsampling methods (such as maximum pooling and cross-row convolution) perform well in feature aggregation, receptive…

Computer Vision and Pattern Recognition · Computer Science 2025-07-22 Wenbo Yue , Chang Li , Guoping Xu

Contemporary approaches to instance segmentation in cell science use 2D or 3D convolutional networks depending on the experiment and data structures. However, limitations in microscopy systems or efforts to prevent phototoxicity commonly…

Computer Vision and Pattern Recognition · Computer Science 2023-01-27 Christopher Z. Eddy , Austin Naylor , Bo Sun

The ability to automatically detect certain types of cells or cellular subunits in microscopy images is of significant interest to a wide range of biomedical research and clinical practices. Cell detection methods have evolved from…

Computer Vision and Pattern Recognition · Computer Science 2018-02-22 Yao Xue , Nilanjan Ray

Accurately segmenting and individualizing cells in SEM images is a highly promising technique for elucidating tissue architecture in oncology. While current AI-based methods are effective, errors persist, necessitating time-consuming manual…

Image and Video Processing · Electrical Eng. & Systems 2025-04-11 Florian Robert , Alexia Calovoulos , Laurent Facq , Fanny Decoeur , Etienne Gontier , Christophe F. Grosset , Baudouin Denis de Senneville

U-Net architectures have been instrumental in advancing biomedical image segmentation (BIS) but often struggle with capturing long-range information. One reason is the conventional down-sampling techniques that prioritize computational…

Computer Vision and Pattern Recognition · Computer Science 2026-02-24 Mingjie Li , Yizheng Chen , Md Tauhidul Islam , Lei Xing

Positron Emission Tomography (PET) is an essential technique in many clinical applications that allows for quantitative imaging at the molecular level. This study aims to develop a denoising method using novel dilated convolutional neural…

Medical Physics · Physics 2021-01-27 Karl Spuhler , Mario Serrano-Sosa , Renee Cattell , Christine DeLorenzo , Chuan Huang

Metric learning networks are used to compute image embeddings, which are widely used in many applications such as image retrieval and face recognition. In this paper, we propose to use network distillation to efficiently compute image…

Computer Vision and Pattern Recognition · Computer Science 2019-04-09 Lu Yu , Vacit Oguz Yazici , Xialei Liu , Joost van de Weijer , Yongmei Cheng , Arnau Ramisa

Automated cell detection and localization from microscopy images are significant tasks in biomedical research and clinical practice. In this paper, we design a new cell detection and localization algorithm that combines deep convolutional…

Computer Vision and Pattern Recognition · Computer Science 2018-10-09 Yao Xue , Gilbert Bigras , Judith Hugh , Nilanjan Ray

Purpose: The aim of this work is to demonstrate that convolutional neural networks (CNN) can be applied to extremely sparse image libraries by subdivision of the original image datasets. Methods: Image datasets from a conventional digital…

Computer Vision and Pattern Recognition · Computer Science 2020-10-27 Johan P. Boetker

Single cell segmentation is critical and challenging in live cell imaging data analysis. Traditional image processing methods and tools require time-consuming and labor-intensive efforts of manually fine-tuning parameters. Slight variations…

Quantitative Methods · Quantitative Biology 2019-04-24 Weikang Wang , David A. Taft , Yi-Jiun Chen , Jingyu Zhang , Callen T. Wallace , Min Xu , Simon C. Watkins , Jianhua Xing

Recent progress on salient object detection (SOD) mainly benefits from multi-scale learning, where the high-level and low-level features collaborate in locating salient objects and discovering fine details, respectively. However, most…

Computer Vision and Pattern Recognition · Computer Science 2022-08-04 Yu-Huan Wu , Yun Liu , Le Zhang , Ming-Ming Cheng , Bo Ren
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