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Electronic logic gates are the basic building blocks of every computing and micro controlling system. Logic gates are made of switches, such as diodes and transistors. Ion-selective, ionic switches may emulate electronic switches [1-8]. If…

Chemical Physics · Physics 2017-10-11 Haim Grebel

Neuromorphic computing is an emerging technology enabling low-latency and energy-efficient signal processing. A key algorithmic tool in neuromorphic computing is spiking neural networks (SNNs). SNNs are biologically inspired neural networks…

Machine Learning · Computer Science 2025-08-11 Sanja Karilanova , Subhrakanti Dey , Ayça Özçelikkale

Transient or partial synchronization can be used to do computations, although a fully synchronized network is frequently related to epileptic seizures. Here, we propose a homeostatic mechanism that is capable of maintaining a neuronal…

Adaptation and Self-Organizing Systems · Physics 2024-05-21 Sue L. Rhâmidda , Mauricio Girardi-Schappo , Osame Kinouchi

Persistent neural activity underlying working memory requires sustained synaptic transmission, yet the metabolic and neurotransmitter support provided by astrocyte networks is largely absent from spatially extended neural circuit models. We…

Neurons and Cognition · Quantitative Biology 2026-04-14 Noah Palmer , Heather L. Cihak , Daniele Avitabile , Zachary P. Kilpatrick

Mathematical model of spiking neuron network (SNN) supplied by astrocytes is investigated. The astrocytes are specific type of brain cells which are not electrically excitable but inducing chemical modulations of neuronal firing. We…

Neurons and Cognition · Quantitative Biology 2023-12-07 Sergey V. Stasenko , Victor B. Kazantsev

Electrode-immobilized glucose-6-phosphate dehydrogenase is used to catalyze an enzymatic reaction which carries out the AND logic gate. This logic function is considered here in the context of biocatalytic processes utilized for the…

Molecular Networks · Quantitative Biology 2010-10-12 Vladimir Privman , Valber Pedrosa , Dmitriy Melnikov , Marcos Pita , Aleksandr Simonian , Evgeny Katz

Living organisms rely on molecular networks, such as gene circuits and signaling pathways, for information processing and robust decision-making in crowded, noisy environments. Recent advances show that interacting biomolecules…

Modeling the neuronal processes underlying short-term working memory remains the focus of many theoretical studies in neuroscience. Here we propose a mathematical model of spiking neuron network (SNN) demonstrating how a piece of…

Neurons and Cognition · Quantitative Biology 2021-09-01 Yuliya Tsybina , Innokentiy Kastalskiy , Mikhail Krivonosov , Alexey Zaikin , Victor Kazantsev , Alexander Gorban , Susanna Gordleeva

Most all-optical logic processing devices reported in the literature rely on nonlinear effects, which increase implementation complexity and hinder scalability in larger optical circuits. In this work, we present the numerical modeling of…

Optics · Physics 2025-12-24 J. P. T. Rodrigues , F. L. B. Martins , J. C. do Nascimento

How neurons integrate the myriad synaptic inputs scattered across their dendrites is a fundamental question in neuroscience. Multiple neurophysiological experiments have shown that dendritic non-linearities can have a strong influence on…

Neurons and Cognition · Quantitative Biology 2025-01-13 Clarissa Lauditi , Enrico M. Malatesta , Fabrizio Pittorino , Carlo Baldassi , Nicolas Brunel , Riccardo Zecchina

Plasticity circuits in the brain are known to be influenced by the distribution of the synaptic weights through the mechanisms of synaptic integration and local regulation of synaptic strength. However, the complex interplay of…

Neural and Evolutionary Computing · Computer Science 2021-04-26 Giorgia Dellaferrera , Stanislaw Wozniak , Giacomo Indiveri , Angeliki Pantazi , Evangelos Eleftheriou

A fundamental function of cortical circuits is the integration of information from different sources to form a reliable basis for behavior. While animals behave as if they optimally integrate information according to Bayesian probability…

Neurons and Cognition · Quantitative Biology 2023-09-22 Jakob Jordan , João Sacramento , Willem A. M. Wybo , Mihai A. Petrovici , Walter Senn

We report the first realization of a biomolecular AND gate function with double-sigmoid response (sigmoid in both inputs). Two enzyme biomarker inputs activate the gate output signal which can then be used as indicating liver injury, but…

Molecular Networks · Quantitative Biology 2013-04-16 Jan Halamek , Oleksandr Zavalov , Lenka Halamkova , Sevim Korkmaz , Vladimir Privman , Evgeny Katz

In living systems, we often see the emergence of the ingredients necessary for computation -- the capacity for information transmission, storage, and modification -- begging the question of how we may exploit or imitate such biological…

Neurons and Cognition · Quantitative Biology 2020-09-11 Kristine Heiney , Gunnar Tufte , Stefano Nichele

Neuromorphic devices represent an attempt to mimic aspects of the brain's architecture and dynamics with the aim of replicating its hallmark functional capabilities in terms of computational power, robust learning and energy efficiency. We…

In this study, we explore how the combination of synthetic biology, neuroscience modeling, and neuromorphic electronic systems offers a new approach to creating an artificial system that mimics the natural sense of smell. We argue that a…

Neural and Evolutionary Computing · Computer Science 2025-08-04 Kevin Max , Larissa Sames , Shimeng Ye , Jan Steinkühler , Federico Corradi

The aim of this paper is to give an overview of brain organoid computing, its characteristics, challenges, as well as possible advantages for future applications in the field of artificial intelligence. An important part is the extensive…

Emerging Technologies · Computer Science 2025-11-04 Yannic Talavera , Bernd Ulmann

Cue integration, the combination of different sources of information to reduce uncertainty, is a fundamental computational principle of brain function. Starting from a normative model we show that the dynamics of multi-compartment neurons…

Neurons and Cognition · Quantitative Biology 2020-06-29 Jakob Jordan , João Sacramento , Mihai A. Petrovici , Walter Senn

An increasing body of evidence suggests that the trial-to-trial variability of spiking activity in the brain is not mere noise, but rather the reflection of a sampling-based encoding scheme for probabilistic computing. Since the precise…

We consider approaches for controlling the buildup of noise by design of gates for chemical and biomolecular computing, in order to realize stable, scalable networks for multi-step information processing. Solvable rate-equation models are…

Biological Physics · Physics 2011-02-28 Vladimir Privman