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Citing data and software is a means to give scholarly credit and to facilitate access to research objects. Citation principles encourage authors to provide full descriptions of objects, with stable links, in their papers. As Jupyter…

Digital Libraries · Computer Science 2020-04-28 Morgan F. Wofford , Bernadette M. Boscoe , Christine L. Borgman , Irene V. Pasquetto , Milena S. Golshan

Computational notebooks became indispensable tools for research-related development, offering unprecedented interactivity and flexibility in the development process. However, these benefits come at the cost of reproducibility and an…

Software Engineering · Computer Science 2024-05-06 Konstantin Grotov , Sergey Titov , Yaroslav Zharov , Timofey Bryksin

Jupyter notebooks enable developers to interleave code snippets with rich-text and in-line visualizations. Data scientists use Jupyter notebook as the de-facto standard for creating and sharing machine-learning based solutions, primarily…

Software Engineering · Computer Science 2024-06-12 Ashwin Prasad Shivarpatna Venkatesh , Samkutty Sabu , Mouli Chekkapalli , Jiawei Wang , Li Li , Eric Bodden

In software engineering, numerous studies have focused on the analysis of fine-grained logs, leading to significant innovations in areas such as refactoring, security, and code completion. However, no similar studies have been conducted for…

Nowadays, numerous industries have exceptional demand for skills in data science, such as data analysis, data mining, and machine learning. The computational notebook (e.g., Jupyter Notebook) is a well-known data science tool adopted in…

Jupyter notebooks has emerged as a standard tool for data science programming. Programs in Jupyter notebooks are different from typical programs as they are constructed by a collection of code snippets interleaved with text and…

Software Engineering · Computer Science 2021-03-02 Malin Källén , Tobias Wrigstad

The massive trend of integrating data-driven AI capabilities into traditional software systems is rising new intriguing challenges. One of such challenges is achieving a smooth transition from the explorative phase of Machine Learning…

Software Engineering · Computer Science 2022-05-25 Luigi Quaranta

Scientific workflows facilitate computational, data manipulation, and sometimes visualization steps for scientific data analysis. They are vital for reproducing and validating experiments, usually involving computational steps in scientific…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-22 Jinli Duan , Shasha Dennis

AI-powered code assistants, such as Copilot, are quickly becoming a ubiquitous component of contemporary coding contexts. Among these environments, computational notebooks, such as Jupyter, are of particular interest as they provide rich…

Human-Computer Interaction · Computer Science 2023-01-27 Andrew M. McNutt , Chenglong Wang , Robert A. DeLine , Steven M. Drucker

Using computational notebooks (e.g., Jupyter Notebook), data scientists rationalize their exploratory data analysis (EDA) based on their prior experience and external knowledge such as online examples. For novices or data scientists who…

Human-Computer Interaction · Computer Science 2021-12-16 Xingjun Li , Yizhi Zhang , Justin Leung , Chengnian Sun , Jian Zhao

In this article we describe how we successfully incorporated data analysis in Python in a first-year laboratory course without significantly altering the course structure and without overburdening students. We show how we created and used…

Physics Education · Physics 2023-09-13 Eugenio Tufino , Stefano Oss , Micol Alemani

Jupyter Notebook is the tool of choice of many data scientists in the early stages of ML workflows. The notebook format, however, has been criticized for inducing bad programming practices; indeed, researchers have already shown that…

Software Engineering · Computer Science 2022-05-25 Luigi Quaranta , Fabio Calefato , Filippo Lanubile

The increasing adoption of Jupyter notebooks in data science and machine learning workflows has created a gap between exploratory code development and production-ready software systems. While notebooks excel at iterative development and…

Software Engineering · Computer Science 2025-11-11 Hanya Elhashemy , Youssef Lotfy , Yongjian Tang

Computational notebook software such as Jupyter Notebook is popular for data science tasks. Numerous computational notebooks are available on the Web and reusable; however, searching for computational notebooks manually is a tedious task,…

Information Retrieval · Computer Science 2022-02-01 Misato Horiuchi , Yuya Sasaki , Chuan Xiao , Makoto Onizuka

With the goal of identifying common practices in data science projects, this paper proposes a framework for logging and understanding incremental code executions in Jupyter notebooks. This framework aims to allow reasoning about how…

Human-Computer Interaction · Computer Science 2024-05-29 Jinjin Zhao , Avidgor Gal , Sanjay Krishnan

Jupyter Notebook is a popular tool among data analysts and scientists for working with data. It provides a way to combine code, documentation, and visualizations in a single, interactive environment, facilitating code reuse. While code…

Software Engineering · Computer Science 2023-02-24 Mingke Yang , Yuming Zhou , Bixin Li , Yutian Tang

Computational notebooks have emerged as the platform of choice for data science and analytical workflows, enabling rapid iteration and exploration. By keeping intermediate program state in memory and segmenting units of execution into…

Software Engineering · Computer Science 2021-06-22 Stephen Macke , Hongpu Gong , Doris Jung-Lin Lee , Andrew Head , Doris Xin , Aditya Parameswaran

Jupyter notebooks allow to bundle executable code with its documentation and output in one interactive environment, and they represent a popular mechanism to document and share computational workflows, including for research publications.…

Computational Engineering, Finance, and Science · Computer Science 2022-09-12 Sheeba Samuel , Daniel Mietchen

Computational notebooks, such as Jupyter Notebook, have become data scientists' de facto programming environments. Many visualization researchers and practitioners have developed interactive visualization tools that support notebooks, yet…

Human-Computer Interaction · Computer Science 2024-04-01 Zijie J. Wang , David Munechika , Seongmin Lee , Duen Horng Chau

The paper presents two complementary strategies for identifying errors in spreadsheet programs. The strategies presented are grounded on the assumption that spreadsheets are software, albeit of a different nature than conventional…

Software Engineering · Computer Science 2011-02-19 Yirsaw Ayalew , Markus Clermont , Roland T. Mittermeir