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Flow through porous, elastically deforming media is present in a variety of natural contexts ranging from large-scale geophysics to cellular biology. In the case of incompressible constituents, the porefluid pressure acts as a Lagrange…

Fluid Dynamics · Physics 2022-06-30 Nicholas J. Derr , Chris H. Rycroft

Spreading of bacteria in a highly advective, disordered environment is examined. Predictions of super-diffusive spreading for a simplified reaction-diffusion equation are tested. Concentration profiles display anomalous growth and…

Biological Physics · Physics 2007-05-23 John H. Carpenter , Karin A. Dahmen

Chemical reactions in small droplets are extensively explored to accelerate the discovery of new materials, increase efficiency and specificity in catalytic biphasic conversion and in high throughput analytics. In this work, we investigate…

Chemical Physics · Physics 2022-03-10 Zhengxin Li , Hongbo Zeng , Xuehua Zhang

We study propagation dynamics of a particle phase in a single-file pore connected to a reservoir of particles (bulk liquid phase). We show that the total mass $M(t)$ of particles entering the pore up to time $t$ grows as $M(t) = 2…

Soft Condensed Matter · Physics 2007-05-23 A. M. Lacasta , J. M. Sancho , F. Sagues , G. Oshanin

The transport of an infinitely thin, hard rod in a random, dense array of point obstacles is investigated by molecular dynamics simulations. Our model mimics the sterically hindered dynamics in dense needle liquids. The center-of-mass…

Statistical Mechanics · Physics 2008-09-22 Felix Höfling , Erwin Frey , Thomas Franosch

Diffusive transport of a particle in spatially correlated random energy landscape having exponential density of states has been considered. We exactly calculate the diffusivity in the nondispersive quasi-equilibrium transport regime and…

Disordered Systems and Neural Networks · Physics 2018-02-14 S. V. Novikov

A fluid in a pore can form diverse heterogeneous structures. We combine a capillary description with the cubic-plus-association equation of state to study the thermodynamic stability of droplets, bubbles and films of water at 358 K in a…

Computational Physics · Physics 2019-09-04 Magnus Aa. Gjennestad , Øivind Wilhelmsen

The process of `Evolutionary Diffusion', i.e. reproduction with local mutation but without selection in a biological population, resembles standard Diffusion in many ways. However, Evolutionary Diffusion allows the formation of local peaks…

Populations and Evolution · Quantitative Biology 2007-05-23 Daniel John Lawson , Henrik Jeldtoft Jensen

A simple manner to describe the diffusive relaxation of a colloidal fluid adsorbed in a porous medium is to model the porous medium as a set of spherical particles fixed in space at random positions with prescribed statistical structural…

The diffusion of active microscopic organisms in complex environments plays an important role in a wide range of biological phenomena from cell colony growth to single organism transport. Here, we investigate theoretically and…

Fluid Dynamics · Physics 2018-01-16 Juan L. Aragones , Shahrzad Yazdi , Alfredo Alexander-Katz

We derive and study a theoretical description for single file diffusion, i.e., diffusion in a one dimensional lattice of particles with hard core interaction. It is well known that for this system a tagged particle has anomalous diffusion…

Statistical Mechanics · Physics 2013-10-08 Gonzalo Suárez , Miguel Hoyuelos , Héctor O. Mártin

Nonlinear evolution equations of the fourth order and its partial cases are derived for describing nonlinear pressure waves in a mixture liquid and gas bubbles. Influence of viscosity and heat transfer is taken into account. Exact solutions…

Pattern Formation and Solitons · Physics 2011-12-23 Nikolay A. Kudryashov , Dmitry I. Sinelshchikov

The equation of impurity diffusion due to formation, migration, and dissolution of the pairs "impurity atom - intrinsic point defect" taking into account the nonuniform distributions of nonequilibrium point defects and drift of the pairs in…

Materials Science · Physics 2011-06-14 O. I. Velichko , V. A. Burko

This paper studies the mechanisms of dispersion in the laminar flow through the pore space of a $3$-dimensional porous medium. We focus on pre-asymptotic transport prior to the asymptotic hydrodynamic dispersion regime, in which solute…

Fluid Dynamics · Physics 2018-03-05 Marco Dentz , Matteo Icardi , Juan J. Hidalgo

Diffusion of a two component fluid is studied in the framework of differential equations, but where these equations are systematically derived from a well-defined microscopic model. The model has a finite carrying capacity imposed upon it…

Statistical Mechanics · Physics 2015-06-04 D. Fanelli , A. J. McKane , G. Pompili , B. Tiribilli , M. Vassalli , T. Biancalani

The evolution of galaxies results from a combination of internal and external processes. The star formation is an internal process transforming cold and dense cores of molecular clouds to stars. It may be triggered internally by expanding…

Astrophysics · Physics 2008-11-26 Jan Palouš

The paper shows how the diffusive movement of ions through a channel protein can be described as a chemical reaction over an arbitrary shaped potential barrier. The result is simple and intuitive but without approximation beyond the…

Biomolecules · Quantitative Biology 2008-07-10 Bob Eisenberg

We consider a finite element approximation for a system consisting of the evolution of a closed planar curve by forced curve shortening flow coupled to a reaction-diffusion equation on the evolving curve. The scheme for the curve evolution…

Numerical Analysis · Mathematics 2016-07-07 John W. Barrett , Klaus Deckelnick , Vanessa Styles

Reaction-diffusion equations describe various spatially extended processes that unfold as traveling fronts moving at constant velocity. We introduce and solve analytically a model that, besides such fronts, supports solutions advancing as…

Biological Physics · Physics 2026-02-13 Louis Brezin , Kyle J. Shaffer , Kirill S. Korolev

Angular momentum redistribution within barred galaxies drives their dynamical evolution. Angular momentum is emitted mainly by near-resonant material in the bar region and absorbed by resonant material mainly in the outer disc and in the…

Astrophysics · Physics 2009-11-10 E. Athanassoula