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The "RNA world" represents a novel frontier for the study of fundamental biological processes and human diseases and is paving the way for the development of new drugs tailored to the patient's biomolecular characteristics. Although…

Knowledge graph is a kind of valuable knowledge base which would benefit lots of AI-related applications. Up to now, lots of large-scale knowledge graphs have been built. However, most of them are non-Chinese and designed for general…

Artificial Intelligence · Computer Science 2018-12-18 Feiliang Ren , Yining Hou , Yan Li , Linfeng Pan , Yi Zhang , Xiaobo Liang , Yongkang Liu , Yu Guo , Rongsheng Zhao , Ruicheng Ming , Huiming Wu

Knowledge Graph has been proven effective in modeling structured information and conceptual knowledge, especially in the medical domain. However, the lack of high-quality annotated corpora remains a crucial problem for advancing the…

Computation and Language · Computer Science 2021-09-22 Dejie Chang , Mosha Chen , Chaozhen Liu , Liping Liu , Dongdong Li , Wei Li , Fei Kong , Bangchang Liu , Xiaobin Luo , Ji Qi , Qiao Jin , Bin Xu

Citation recommendation for research papers is a valuable task that can help researchers improve the quality of their work by suggesting relevant related work. Current approaches for this task rely primarily on the text of the papers and…

Digital Libraries · Computer Science 2021-06-11 Arthur Brack , Anett Hoppe , Ralph Ewerth

The continuous growth of scientific literature brings innovations and, at the same time, raises new challenges. One of them is related to the fact that its analysis has become difficult due to the high volume of published papers for which…

Computation and Language · Computer Science 2020-11-06 Danilo Dessì , Francesco Osborne , Diego Reforgiato Recupero , Davide Buscaldi , Enrico Motta

RNA-KG is a recently developed knowledge graph that integrates the interactions involving coding and non-coding RNA molecules extracted from public data sources. It can be used to support the classification of new molecules, identify new…

Databases · Computer Science 2025-08-12 Emanuele Cavalleri , Paolo Perlasca , Marco Mesiti

In research, measuring instruments play a crucial role in producing the data that underpin scientific discoveries. Information about instruments is essential in data interpretation and, thus, knowledge production. However, if at all…

Digital Libraries · Computer Science 2025-07-18 Muhammad Haris , Sören Auer , Markus Stocker

Soil organic carbon is crucial for climate change mitigation and agricultural sustainability. However, understanding its dynamics requires integrating complex, heterogeneous data from multiple sources. This paper introduces the Soil Organic…

Laboratory workflows in pharmaceutical and biomedical research encode substantial tacit knowledge -- expert judgment about failure conditions, decision branching logic, and contextual dependencies -- that remains inaccessible to protocol…

Biomedical knowledge graphs (KGs) are widely used across research and translational settings, yet their design decisions and implementation are often opaque. Unlike ontologies that more frequently adhere to established creation principles,…

Knowledge Organization Systems (KOSs), such as term lists, thesauri, taxonomies, and ontologies, play a fundamental role in categorising, managing, and retrieving information. In the academic domain, KOSs are often adopted for representing…

Digital Libraries · Computer Science 2025-06-12 Angelo Salatino , Tanay Aggarwal , Andrea Mannocci , Francesco Osborne , Enrico Motta

Sharing and reusing research artifacts, such as datasets, publications, or methods is a fundamental part of scientific activity, where heterogeneity of resources and metadata and the common practice of capturing information in unstructured…

The availability of vast amounts of visual data with heterogeneous features is a key factor for developing, testing, and benchmarking of new computer vision (CV) algorithms and architectures. Most visual datasets are created and curated for…

Computer Vision and Pattern Recognition · Computer Science 2024-03-29 Jicheng Yuan , Anh Le-Tuan , Manh Nguyen-Duc , Trung-Kien Tran , Manfred Hauswirth , Danh Le-Phuoc

The growing complexity and volume of climate science literature make it increasingly difficult for researchers to find relevant information across models, datasets, regions, and variables. This paper introduces a domain-specific Knowledge…

Computation and Language · Computer Science 2025-09-15 Mustapha Adamu , Qi Zhang , Huitong Pan , Longin Jan Latecki , Eduard C. Dragut

Knowledge graphs (KGs) are increasingly integrated with large language models (LLMs) to provide structured, verifiable reasoning. A core operation in this integration is multi-hop retrieval, yet existing systems struggle to balance…

Computation and Language · Computer Science 2026-04-22 He Cheng , Yifu Wu , Saksham Khatwani , Maya Kruse , Dmitriy Dligach , Timothy A. Miller , Majid Afshar , Yanjun Gao

Within clinical, biomedical, and translational science, an increasing number of projects are adopting graphs for knowledge representation. Graph-based data models elucidate the interconnectedness between core biomedical concepts, enable…

Biomedical knowledge graphs (BKGs) have emerged as powerful tools for organizing and leveraging the vast and complex data found across the biomedical field. Yet, current reviews of BKGs often limit their scope to specific domains or…

Computation and Language · Computer Science 2025-01-23 Yuxing Lu , Sin Yee Goi , Xukai Zhao , Jinzhuo Wang

Knowledge Graphs (KGs) are extensively used across different domains and in several applications. Often, these KGs are very large in size. Such KGs become unwieldy for tasks such as question answering and visualization. Summarization of KGs…

Artificial Intelligence · Computer Science 2026-05-15 Sohel Aman Khan , Raghava Mutharaju , Supratim Shit

Research publications are the primary vehicle for sharing scientific progress in the form of new discoveries, methods, techniques, and insights. Unfortunately, the lack of a large-scale, comprehensive, and easy-to-use resource capturing the…

Artificial Intelligence · Computer Science 2023-05-22 Kian Ahrabian , Xinwei Du , Richard Delwin Myloth , Arun Baalaaji Sankar Ananthan , Jay Pujara