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This paper introduces torchsom, an open-source Python library that provides a reference implementation of the Self-Organizing Map (SOM) in PyTorch. This package offers three main features: (i) dimensionality reduction, (ii) clustering, and…

Machine Learning · Statistics 2025-10-14 Louis Berthier , Ahmed Shokry , Maxime Moreaud , Guillaume Ramelet , Eric Moulines

The self-organizing map (SOM) is an unsupervised artificial neural network that is widely used in, e.g., data mining and visualization. Supervised and semi-supervised learning methods have been proposed for the SOM. However, their teacher…

Neural and Evolutionary Computing · Computer Science 2020-03-03 Akinari Onishi

The Self-Organizing Map (SOM) with its related extensions is the most popular artificial neural algorithm for use in unsupervised learning, clustering, classification and data visualization. Over 5,000 publications have been reported in the…

Neural and Evolutionary Computing · Computer Science 2011-11-09 Marie Cottrell , Michel Verleysen

The General Automated Machine learning Assistant (GAMA) is a modular AutoML system developed to empower users to track and control how AutoML algorithms search for optimal machine learning pipelines, and facilitate AutoML research itself.…

Machine Learning · Computer Science 2021-10-08 Pieter Gijsbers , Joaquin Vanschoren

Neural Networks are notoriously difficult to inspect. We introduce comgra, an open source python library for use with PyTorch. Comgra extracts data about the internal activations of a model and organizes it in a GUI (graphical user…

Machine Learning · Computer Science 2024-08-01 Florian Dietz , Sophie Fellenz , Dietrich Klakow , Marius Kloft

OpenMatch is a Python-based library that serves for Neural Information Retrieval (Neu-IR) research. It provides self-contained neural and traditional IR modules, making it easy to build customized and higher-capacity IR systems. In order to…

Information Retrieval · Computer Science 2021-05-07 Zhenghao Liu , Kaitao Zhang , Chenyan Xiong , Zhiyuan Liu , Maosong Sun

DynamicGEM is an open-source Python library for learning node representations of dynamic graphs. It consists of state-of-the-art algorithms for defining embeddings of nodes whose connections evolve over time. The library also contains the…

Machine Learning · Computer Science 2018-11-28 Palash Goyal , Sujit Rokka Chhetri , Ninareh Mehrabi , Emilio Ferrara , Arquimedes Canedo

In order to automate AI research we introduce a full, end-to-end framework, OMEGA: Optimizing Machine learning by Evaluating Generated Algorithms, that starts at idea generation and ends with executable code. Our system combines structured…

Artificial Intelligence · Computer Science 2026-04-30 Jeremy Nixon , Annika Singh

Kernel methods have proven to be powerful techniques for pattern analysis and machine learning (ML) in a variety of domains. However, many of their original or advanced implementations remain in Matlab. With the incredible rise and adoption…

Machine Learning · Computer Science 2020-05-28 Pradeep Reddy Raamana

This paper introduces PyGAD, an open-source easy-to-use Python library for building the genetic algorithm. PyGAD supports a wide range of parameters to give the user control over everything in its life cycle. This includes, but is not…

Neural and Evolutionary Computing · Computer Science 2021-06-14 Ahmed Fawzy Gad

We introduce MAGNET, an open-source Python library designed for mesh agglomeration in both two- and three-dimensions, based on employing Graph Neural Networks (GNN). MAGNET serves as a comprehensive solution for training a variety of GNN…

Numerical Analysis · Mathematics 2025-10-27 Paola F. Antonietti , Matteo Caldana , Ilario Mazzieri , Andrea Re Fraschini

Graph representations of programs are commonly a central element of machine learning for code research. We introduce an open source Python library python_graphs that applies static analysis to construct graph representations of Python…

Machine Learning · Computer Science 2022-08-17 David Bieber , Kensen Shi , Petros Maniatis , Charles Sutton , Vincent Hellendoorn , Daniel Johnson , Daniel Tarlow

We introduce aweSOM, an open-source Python package for machine learning (ML) clustering and classification, using a Self-organizing Maps (SOM) algorithm that incorporates CPU/GPU acceleration to accommodate large ($N > 10^6$, where $N$ is…

Machine Learning · Computer Science 2025-04-15 Trung Ha , Joonas Nättilä , Jordy Davelaar

Recently, knowledge graph embeddings (KGEs) received significant attention, and several software libraries have been developed for training and evaluating KGEs. While each of them addresses specific needs, we re-designed and re-implemented…

Machine Learning · Computer Science 2020-07-31 Mehdi Ali , Max Berrendorf , Charles Tapley Hoyt , Laurent Vermue , Sahand Sharifzadeh , Volker Tresp , Jens Lehmann

In many research fields, the sizes of the existing datasets vary widely. Hence, there is a need for machine learning techniques which are well-suited for these different datasets. One possible technique is the self-organizing map (SOM), a…

Machine Learning · Computer Science 2020-01-09 Felix M. Riese , Sina Keller

Self-Organizing Map (SOM) is a promising tool for exploring large multi-dimensional data sets. It is quick and convenient to train in an unsupervised fashion and, as an outcome, it produces natural clusters of data patterns. An example of…

Astrophysics · Physics 2009-11-13 Lukasz Wyrzykowski , Vasily Belokurov

Results of neural network learning are always subject to some variability, due to the sensitivity to initial conditions, to convergence to local minima, and, sometimes more dramatically, to sampling variability. This paper presents a set of…

Statistics Theory · Mathematics 2007-06-13 Eric De Bodt , Marie Cottrell , Michel Verleysen

Bayesian Networks (BNs) are used in various fields for modeling, prediction, and decision making. pgmpy is a python package that provides a collection of algorithms and tools to work with BNs and related models. It implements algorithms for…

Machine Learning · Computer Science 2023-04-19 Ankur Ankan , Johannes Textor

We present NeuralOperator, an open-source Python library for operator learning. Neural operators generalize neural networks to maps between function spaces instead of finite-dimensional Euclidean spaces. They can be trained and inferenced…

Self-Organizing Map algorithms have been used for almost 40 years across various application domains such as biology, geology, healthcare, industry and humanities as an interpretable tool to explore, cluster and visualize high-dimensional…

Neural and Evolutionary Computing · Computer Science 2020-11-12 Florent Forest , Mustapha Lebbah , Hanane Azzag , Jérôme Lacaille
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