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Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Many machine learning algorithms try to visualize high dimensional metric data in 2D in such a way that the essential geometric and topological features of the data are highlighted. In this paper, we introduce a framework for aggregating…

Machine Learning · Computer Science 2025-03-04 Lukas Silvester Barth , Hannaneh Fahimi , Parvaneh Joharinad , Jürgen Jost , Janis Keck

This paper presents a kernelized version of the t-SNE algorithm, capable of mapping high-dimensional data to a low-dimensional space while preserving the pairwise distances between the data points in a non-Euclidean metric. This can be…

Machine Learning · Computer Science 2023-11-22 Denis C. Ilie-Ablachim , Bogdan Dumitrescu , Cristian Rusu

In ordinary Dimensionality Reduction (DR), each data instance in a high dimensional space (original space), or on a distance matrix denoting original space distances, is mapped to (projected onto) one point in a low dimensional space…

Computer Vision and Pattern Recognition · Computer Science 2022-06-28 Farshad Barahimi

Dimensionality reduction techniques are powerful tools for data preprocessing and visualization which typically come with few guarantees concerning the topological correctness of an embedding. The interleaving distance between the…

Machine Learning · Computer Science 2022-02-01 Bradley J. Nelson , Yuan Luo

Dynamic graph learning (DGL) aims to learn informative and temporally-evolving node embeddings to support downstream tasks such as link prediction. A fundamental challenge in DGL lies in effectively modeling both the temporal dynamics and…

Social and Information Networks · Computer Science 2025-06-10 Ling Wang

Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…

Machine Learning · Computer Science 2021-05-18 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang

Visual localization is critical to many applications in computer vision and robotics. To address single-image RGB localization, state-of-the-art feature-based methods match local descriptors between a query image and a pre-built 3D model.…

Computer Vision and Pattern Recognition · Computer Science 2020-04-02 Xiaotian Li , Shuzhe Wang , Yi Zhao , Jakob Verbeek , Juho Kannala

We introduce a graphical presentation for the false nearest neighbors (FNN) method. In the original method only the percentage of false neighbors is computed without regard to the distribution of neighboring points in the time-delay…

chao-dyn · Physics 2009-10-31 T. Aittokallio , M. Gyllenberg , J. Hietarinta , T. Kuusela , T. Multamaki

'Big' high-dimensional data are commonly analyzed in low-dimensions, after performing a dimensionality-reduction step that inherently distorts the data structure. For the same purpose, clustering methods are also often used. These methods…

Machine Learning · Statistics 2019-02-20 Tom Lorimer , Karlis Kanders , Ruedi Stoop

During the last decade, hyperspectral images have attracted increasing interest from researchers worldwide. They provide more detailed information about an observed area and allow an accurate target detection and precise discrimination of…

Computer Vision and Pattern Recognition · Computer Science 2022-10-26 Asma Elmaizi , Hasna Nhaila , Elkebir Sarhrouni , Ahmed Hammouch , Nacir Chafik

We first show that the commonly used dimensionality reduction (DR) methods such as t-SNE and LargeVis poorly capture the global structure of the data in the low dimensional embedding. We show this via a number of tests for the DR methods…

Machine Learning · Computer Science 2018-03-05 Ehsan Amid , Manfred K. Warmuth

Node embeddings are a paradigm in non-parametric graph representation learning, where graph nodes are embedded into a given vector space to enable downstream processing. State-of-the-art node-embedding algorithms, such as DeepWalk and…

Machine Learning · Computer Science 2025-11-25 Jan Niklas Böhm , Marius Keute , Alica Guzmán , Sebastian Damrich , Andrew Draganov , Dmitry Kobak

Uniform Manifold Approximation and Projection (UMAP) is one of the state-of-the-art methods for dimensionality reduction and data visualization. This is a tutorial and survey paper on UMAP and its variants. We start with UMAP algorithm…

Human-Computer Interaction · Computer Science 2021-09-07 Benyamin Ghojogh , Ali Ghodsi , Fakhri Karray , Mark Crowley

High-dimensional data visualization is crucial in the big data era and these techniques such as t-SNE and UMAP have been widely used in science and engineering. Big data, however, is often distributed across multiple data centers and…

Machine Learning · Computer Science 2024-12-19 Dong Qiao , Xinxian Ma , Jicong Fan

Motivated by applications in computer vision and databases, we introduce and study the Simultaneous Nearest Neighbor Search (SNN) problem. Given a set of data points, the goal of SNN is to design a data structure that, given a collection of…

Data Structures and Algorithms · Computer Science 2016-04-11 Piotr Indyk , Robert Kleinberg , Sepideh Mahabadi , Yang Yuan

The computation of distance measures between nodes in graphs is inefficient and does not scale to large graphs. We explore dense vector representations as an effective way to approximate the same information: we introduce a simple yet…

Computation and Language · Computer Science 2019-06-18 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

We study the $r$-near neighbors reporting problem ($r$-NN), i.e., reporting \emph{all} points in a high-dimensional point set $S$ that lie within a radius $r$ of a given query point $q$. Our approach builds upon on the locality-sensitive…

Databases · Computer Science 2017-03-29 Ninh Pham

Finding meaningful representations and distances of hierarchical data is important in many fields. This paper presents a new method for hierarchical data embedding and distance. Our method relies on combining diffusion geometry, a central…

Machine Learning · Computer Science 2023-05-31 Ya-Wei Eileen Lin , Ronald R. Coifman , Gal Mishne , Ronen Talmon

In recent years, deep learning has led to impressive results in many fields. In this paper, we introduce a multi-scale artificial neural network for high-dimensional non-linear maps based on the idea of hierarchical nested bases in the fast…

Numerical Analysis · Mathematics 2019-02-27 Yuwei Fan , Jordi Feliu-Faba , Lin Lin , Lexing Ying , Leonardo Zepeda-Nunez
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