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In a bipartite graph, a subgraph is an $s$-biplex if each vertex of the subgraph is adjacent to all but at most $s$ vertices on the opposite set. The enumeration of $s$-biplexes from a given graph is a fundamental problem in bipartite graph…

Information Retrieval · Computer Science 2025-06-13 Zhenxiang Xu , Yiping Liu , Yi Zhou , Yimin Hao , Zhengren Wang

We consider the problem of enumerating all instances of a given pattern graph in a large data graph. Our focus is on determining the input/output (I/O) complexity of this problem. Let $E$ be the number of edges in the data graph, $k=O(1)$…

Data Structures and Algorithms · Computer Science 2015-11-13 Francesco Silvestri

Counting k-cliques in a graph is an important problem in graph analysis with many applications such as community detection and graph partitioning. Counting k-cliques is typically done by traversing search trees starting at each vertex in…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-06-07 Mohammad Almasri , Izzat El Hajj , Rakesh Nagi , Jinjun Xiong , Wen-mei Hwu

Closeness is a widely-studied centrality measure. Since it requires all pairwise distances, computing closeness for all nodes is infeasible for large real-world networks. However, for many applications, it is only necessary to find the k…

Data Structures and Algorithms · Computer Science 2017-10-04 Patrick Bisenius , Elisabetta Bergamini , Eugenio Angriman , Henning Meyerhenke

The densest $k$-subgraph problem is the problem of finding a $k$-vertex subgraph of a graph with the maximum number of edges. In order to solve large instances of the densest $k$-subgraph problem, we introduce two algorithms that are based…

Optimization and Control · Mathematics 2019-01-21 Renata Sotirov

Maximal clique enumeration is a fundamental graph mining task, but its utility is often limited by computational intractability and highly redundant output. To address these challenges, we introduce \emph{$\rho$-dense aggregators}, a novel…

Data Structures and Algorithms · Computer Science 2025-12-04 Noga Alon , Sabyasachi Basu , Shweta Jain , Haim Kaplan , Jakub Łącki , Blair D. Sullivan

Given a sparse undirected graph G with weights on the edges, a k-plex partition of G is a partition of its set of nodes such that each component is a k-plex. A subset of nodes S is a k-plex if the degree of every node in the associated…

Combinatorics · Mathematics 2016-12-20 Pedro Martins

\emph{$K$-best enumeration}, which asks to output $k$-best solutions without duplication, is a helpful tool in data analysis for many fields. In such fields, graphs typically represent data. Thus subgraph enumeration has been paid much…

Data Structures and Algorithms · Computer Science 2024-05-14 Kazuhiro Kurita , Kunihiro Wasa

Finding the k-medianin a network involves identifying a subset of k vertices that minimize the total distance to all other vertices in a graph. This problem has been extensively studied in computer science, graph theory, operations…

Data Structures and Algorithms · Computer Science 2023-12-14 Roldan Pozo

We address the problem of enumerating all maximal clique-partitions of an undirected graph and present an algorithm based on the observation that every maximal clique-partition can be produced from the maximal clique-cover of the graph by…

Discrete Mathematics · Computer Science 2023-09-26 Mircea Marin , Temur Kutsia , Cleo Pau , Mikheil Rukhaia

One of the biggest huddles faced by researchers studying algorithms for massive graphs is the lack of large input graphs that are essential for the development and test of the graph algorithms. This paper proposes two efficient and highly…

Distributed, Parallel, and Cluster Computing · Computer Science 2010-03-22 Andy Yoo , Keith Henderson

Mining cohesive subgraphs from a graph is a fundamental problem in graph data analysis. One notable cohesive structure is $\gamma$-quasi-clique (QC), where each vertex connects at least a fraction $\gamma$ of the other vertices inside.…

Databases · Computer Science 2023-08-29 Kaiqiang Yu , Cheng Long

The maximum labelled clique problem is a variant of the maximum clique problem where edges in the graph are given labels, and we are not allowed to use more than a certain number of distinct labels in a solution. We introduce a new…

Data Structures and Algorithms · Computer Science 2014-11-18 Ciaran McCreesh , Patrick Prosser

Quasi-cliques are dense incomplete subgraphs of a graph that generalize the notion of cliques. Enumerating quasi-cliques from a graph is a robust way to detect densely connected structures with applications to bio-informatics and social…

Data Structures and Algorithms · Computer Science 2020-02-04 Seyed-Vahid Sanei-Mehri , Apurba Das , Srikanta Tirthapura

We consider the enumeration of maximal bipartite cliques (bicliques) from a large graph, a task central to many practical data mining problems in social network analysis and bioinformatics. We present novel parallel algorithms for the…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-04-22 Arko Provo Mukherjee , Srikanta Tirthapura

The $ k $-plex model, which allows each vertex to miss connections with up to $ k $ neighbors, serves as a relaxation of the clique. Its adaptability makes it more suitable for analyzing real-world graphs where noise and imperfect data are…

Databases · Computer Science 2025-09-24 Xiaofan Li , Gao Cong , Rui Zhou

Bipartite graphs are a prevalent modeling tool for real-world networks, capturing interactions between vertices of two different types. Within this framework, bicliques emerge as crucial structures when studying dense subgraphs: they are…

Data Structures and Algorithms · Computer Science 2024-05-27 Alexis Baudin , Clémence Magnien , Lionel Tabourier

The problem of identifying the maximum edge biclique in bipartite graphs has attracted considerable attention in bipartite graph analysis, with numerous real-world applications such as fraud detection, community detection, and online…

Data Structures and Algorithms · Computer Science 2025-06-23 Donghang Cui , Ronghua Li , Qiangqiang Dai , Hongchao Qin , Guoren Wang

We consider the problem of enumerating optimal solutions for two hypergraph $k$-partitioning problems -- namely, Hypergraph-$k$-Cut and Minmax-Hypergraph-$k$-Partition. The input in hypergraph $k$-partitioning problems is a hypergraph…

Data Structures and Algorithms · Computer Science 2023-03-09 Calvin Beideman , Karthekeyan Chandrasekaran , Weihang Wang

Graphlets of order $k$ in a graph $G$ are connected subgraphs induced by $k$ nodes (called $k$-graphlets) or by $k$ edges (called edge $k$-graphlets). They are among the interesting subgraphs in network analysis to get insights on both the…

Data Structures and Algorithms · Computer Science 2025-05-15 Alessio Conte , Roberto Grossi , Yasuaki Kobayashi , Kazuhiro Kurita , Davide Rucci , Takeaki Uno , Kunihiro Wasa