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Biomedical Named Entity Recognition (NER) is a fundamental task of Biomedical Natural Language Processing for extracting relevant information from biomedical texts, such as clinical records, scientific publications, and electronic health…

Computation and Language · Computer Science 2023-12-27 Fahime Shahrokh , Nasser Ghadiri , Rasoul Samani , Milad Moradi

Entity extraction is fundamental to many text mining tasks such as organisation name recognition. A popular approach to entity extraction is based on matching sub-string candidates in a document against a dictionary of entities. To handle…

Databases · Computer Science 2017-02-14 Zeyi Wen , Dong Deng , Rui Zhang , Kotagiri Ramamohanarao

In recent years, the fine-tuned generative models have been proven more powerful than the previous tagging-based or span-based models on named entity recognition (NER) task. It has also been found that the information related to entities,…

Computation and Language · Computer Science 2024-06-12 Guochao Jiang , Ziqin Luo , Yuchen Shi , Dixuan Wang , Jiaqing Liang , Deqing Yang

Given a patent document, identifying distinct semantic annotations is an interesting research aspect. Text annotation helps the patent practitioners such as examiners and patent attorneys to quickly identify the key arguments of any…

Machine Learning · Computer Science 2021-11-19 Renukswamy Chikkamath , Vishvapalsinhji Ramsinh Parmar , Christoph Hewel , Markus Endres

Natural language processing (NLP) of clinical trial documents can be useful in new trial design. Here we identify entity types relevant to clinical trial design and propose a framework called CT-BERT for information extraction from clinical…

Quantitative Methods · Quantitative Biology 2021-10-20 Xiong Liu , Greg L. Hersch , Iya Khalil , Murthy Devarakonda

Named entity recognition (NER) is a well-studied task in natural language processing. Traditional NER research only deals with flat entities and ignores nested entities. The span-based methods treat entity recognition as a span…

Computation and Language · Computer Science 2021-07-14 Yongliang Shen , Xinyin Ma , Zeqi Tan , Shuai Zhang , Wen Wang , Weiming Lu

We introduce a novel method for converting text data into abstract image representations, which allows image-based processing techniques (e.g. image classification networks) to be applied to text-based comparison problems. We apply the…

Computation and Language · Computer Science 2020-02-07 Stephen M. Petrie , T'Mir D. Julius

Techniques for automatically extracting important content elements from business documents such as contracts, statements, and filings have the potential to make business operations more efficient. This problem can be formulated as a…

Computation and Language · Computer Science 2020-02-06 Ruixue Zhang , Wei Yang , Luyun Lin , Zhengkai Tu , Yuqing Xie , Zihang Fu , Yuhao Xie , Luchen Tan , Kun Xiong , Jimmy Lin

Named entity recognition is a key component of Information Extraction (IE), particularly in scientific domains such as biomedicine and chemistry, where large language models (LLMs), e.g., ChatGPT, fall short. We investigate the…

Computation and Language · Computer Science 2024-04-02 Hongyi Liu , Qingyun Wang , Payam Karisani , Heng Ji

Arguments, counter-arguments, facts, and evidence obtained via documents related to previous court cases are of essential need for legal professionals. Therefore, the process of automatic information extraction from documents containing…

Computation and Language · Computer Science 2019-08-20 Gathika Ratnayaka , Thejan Rupasinghe , Nisansa de Silva , Viraj Salaka Gamage , Menuka Warushavithana , Amal Shehan Perera

Named entity recognition (NER) is an important research problem in natural language processing. There are three types of NER tasks, including flat, nested and discontinuous entity recognition. Most previous sequential labeling models are…

Computation and Language · Computer Science 2023-03-21 Ying Mo , Hongyin Tang , Jiahao Liu , Qifan Wang , Zenglin Xu , Jingang Wang , Wei Wu , Zhoujun Li

In this paper, we extend some usual techniques of classification resulting from a large-scale data-mining and network approach. This new technology, which in particular is designed to be suitable to big data, is used to construct an open…

Physics and Society · Physics 2017-07-05 Antonin Bergeaud , Yoann Potiron , Juste Raimbault

Named entity recognition (NER) is the task to identify mentions of rigid designators from text belonging to predefined semantic types such as person, location, organization etc. NER always serves as the foundation for many natural language…

Computation and Language · Computer Science 2023-04-26 Jing Li , Aixin Sun , Jianglei Han , Chenliang Li

Named entity recognition (NER) is a fundamental component in many applications, such as Web Search and Voice Assistants. Although deep neural networks greatly improve the performance of NER, due to the requirement of large amounts of…

Computation and Language · Computer Science 2021-06-02 Shining Liang , Ming Gong , Jian Pei , Linjun Shou , Wanli Zuo , Xianglin Zuo , Daxin Jiang

Named Entity Recognition (NER) is a challenging and widely studied task that involves detecting and typing entities in text. So far,NER still approaches entity typing as a task of classification into universal classes (e.g. date, person, or…

Computation and Language · Computer Science 2023-02-22 Tristan Luiggi , Laure Soulier , Vincent Guigue , Siwar Jendoubi , Aurélien Baelde

Models based on the transformer architecture, such as BERT, have marked a crucial step forward in the field of Natural Language Processing. Importantly, they allow the creation of word embeddings that capture important semantic information…

Computation and Language · Computer Science 2021-01-01 Jacob Turton , David Vinson , Robert Elliott Smith

The growing developments in general semantic networks, knowledge graphs and ontology databases have motivated us to build a large-scale comprehensive semantic network of technology-related data for engineering knowledge discovery,…

Information Retrieval · Computer Science 2019-10-07 Serhad Sarica , Jianxi Luo , Kristin L. Wood

Pre-trained transformer models shine in many natural language processing tasks and therefore are expected to bear the representation of the input sentence or text meaning. These sentence-level embeddings are also important in…

Computation and Language · Computer Science 2025-02-21 Lukas Stankevičius , Mantas Lukoševičius

Content on the Internet is heterogeneous and arises from various domains like News, Entertainment, Finance and Technology. Understanding such content requires identifying named entities (persons, places and organizations) as one of the key…

Computation and Language · Computer Science 2016-12-02 Vivek Kulkarni , Yashar Mehdad , Troy Chevalier

Information extraction is an important task in NLP, enabling the automatic extraction of data for relational database filling. Historically, research and data was produced for English text, followed in subsequent years by datasets in…

Computation and Language · Computer Science 2019-12-13 Taesun Moon , Parul Awasthy , Jian Ni , Radu Florian
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