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Cardiac Magnetic Resonance (CMR) imaging serves as the gold-standard for evaluating cardiac morphology and function. Typically, a multi-view CMR stack, covering short-axis (SA) and 2/3/4-chamber long-axis (LA) views, is acquired for a…

Image and Video Processing · Electrical Eng. & Systems 2025-07-03 Yundi Zhang , Chen Chen , Suprosanna Shit , Sophie Starck , Daniel Rueckert , Jiazhen Pan

This paper introduces a deep neural network based method, i.e., DeepOrganNet, to generate and visualize high-fidelity 3D / 4D organ geometric models from single-view medical image in real time. Traditional 3D / 4D medical image…

Graphics · Computer Science 2019-07-23 Yifan Wang , Zichun Zhong , Jing Hua

Accurate 3D+t whole-heart mesh reconstruction from cine MRI is a clinically crucial yet technically challenging task. The difficulty of this task arises from two coupled factors: inherently sparse sampling of 3D cardiac anatomy by 2D image…

Computer Vision and Pattern Recognition · Computer Science 2026-05-15 Xiaoyue Liu , Xiaohan Yuan , Mark Y Chan , Ching-Hui Sia , Lei Li

Medical imaging refers to the technologies and methods utilized to view the human body and its inside, in order to diagnose, monitor, or even treat medical disorders. This paper aims to explore the application of deep learning techniques in…

Image and Video Processing · Electrical Eng. & Systems 2024-11-08 Ketan Suhaas Saichandran

Global single-valued biomarkers of cardiac function typically used in clinical practice, such as ejection fraction, provide limited insight on the true 3D cardiac deformation process and hence, limit the understanding of both healthy and…

Image and Video Processing · Electrical Eng. & Systems 2023-07-21 Marcel Beetz , Abhirup Banerjee , Vicente Grau

Accurate analysis of 3D myocardium deformation using high-resolution computerized tomography (CT) datasets with ground truth (GT) annotations is crucial for advancing cardiovascular imaging research. However, the scarcity of such datasets…

Computer Vision and Pattern Recognition · Computer Science 2024-06-04 Shahar Zuler , Dan Raviv

We propose a deep learning method to model and generate synthetic aortic shapes based on representing shapes as the zero-level set of a neural signed distance field, conditioned by a family of trainable embedding vectors with encode the…

Computer Vision and Pattern Recognition · Computer Science 2024-09-25 Andrei Gasparovici , Alex Serban

We present a novel automated method to segment the myocardium of both left and right ventricles in MRI volumes. The segmentation is consistent in 3D across the slices such that it can be directly used for mesh generation. Two specific…

Computer Vision and Pattern Recognition · Computer Science 2018-03-30 Qiao Zheng , Hervé Delingette , Nicolas Duchateau , Nicholas Ayache

Alterations in the geometry and function of the heart define well-established causes of cardiovascular disease. However, current approaches to the diagnosis of cardiovascular diseases often rely on subjective human assessment as well as…

Computer Vision and Pattern Recognition · Computer Science 2018-07-19 Carlo Biffi , Ozan Oktay , Giacomo Tarroni , Wenjia Bai , Antonio De Marvao , Georgia Doumou , Martin Rajchl , Reem Bedair , Sanjay Prasad , Stuart Cook , Declan O'Regan , Daniel Rueckert

Patient-specific left ventricle (LV) myocardial models have the potential to be used in a variety of clinical scenarios for improved diagnosis and treatment plans. Cine cardiac magnetic resonance (MR) imaging provides high resolution images…

Image and Video Processing · Electrical Eng. & Systems 2021-04-01 Roshan Reddy Upendra , Brian Jamison Wentz , Richard Simon , Suzanne M. Shontz , Cristian A. Linte

Automated segmentation of Cardiac Magnetic Resonance (CMR) plays a pivotal role in efficiently assessing cardiac function, offering rapid clinical evaluations that benefit both healthcare practitioners and patients. While recent research…

Image and Video Processing · Electrical Eng. & Systems 2024-06-14 Abdul Qayyum , Hao Xu , Brian P. Halliday , Cristobal Rodero , Christopher W. Lanyon , Richard D. Wilkinson , Steven Alexander Niederer

Statistical shape modeling is the computational process of discovering significant shape parameters from segmented anatomies captured by medical images (such as MRI and CT scans), which can fully describe subject-specific anatomy in the…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Krithika Iyer , Shireen Elhabian

Computational modeling of cardiovascular function has become a critical part of diagnosing, treating and understanding cardiovascular disease. Most strategies involve constructing anatomically accurate computer models of cardiovascular…

Image and Video Processing · Electrical Eng. & Systems 2025-01-28 Numi Sveinsson Cepero , Shawn C. Shadden

Heart is one of the vital organs of human body. A minor dysfunction of heart even for a short time interval can be fatal, therefore, efficient monitoring of its physiological state is essential for the patients with cardiovascular diseases.…

Image and Video Processing · Electrical Eng. & Systems 2019-11-22 Shakeel Muhammad Ibrahim , Muhammad Sohail Ibrahim , Muhammad Usman , Imran Naseem , Muhammad Moinuddin

We present a novel approach to reconstruction of 3D cardiac motion from sparse intraoperative data. While existing methods can accurately reconstruct 3D organ geometries from full 3D volumetric imaging, they cannot be used during surgical…

Computer Vision and Pattern Recognition · Computer Science 2024-12-04 Yihong Chen , Jiancheng Yang , Deniz Sayin Mercadier , Hieu Le , Pascal Fua

The human heart is a sophisticated system composed of four cardiac chambers with distinct shapes, which function in a coordinated manner. Existing shape models of the heart mainly focus on the ventricular chambers and they are derived from…

Image and Video Processing · Electrical Eng. & Systems 2026-03-31 Qiang Ma , Qingjie Meng , Yicheng Wu , Shuo Wang , Mengyun Qiao , Steven Niederer , Declan P. O'Regan , Paul M. Matthews , Wenjia Bai

The efficient construction of anatomical models is one of the major challenges of patient-specific in-silico models of the human heart. Current methods frequently rely on linear statistical models, allowing no advanced topological changes,…

Image and Video Processing · Electrical Eng. & Systems 2024-05-24 Jan Verhülsdonk , Thomas Grandits , Francisco Sahli Costabal , Thomas Pinetz , Rolf Krause , Angelo Auricchio , Gundolf Haase , Simone Pezzuto , Alexander Effland

Delineation of anatomical structures is often the first step of many medical image analysis workflows. While convolutional neural networks achieve high performance, these do not incorporate anatomical shape information. We introduce a novel…

Image and Video Processing · Electrical Eng. & Systems 2023-10-18 Athira J Jacob , Puneet Sharma , Daniel Ruckert

Understanding the structure and motion of the heart is crucial for diagnosing and managing cardiovascular diseases, the leading cause of global death. There is wide variation in cardiac shape and motion patterns, influenced by demographic,…

Artificial Intelligence · Computer Science 2025-06-03 Mengyun Qiao , Kathryn A McGurk , Shuo Wang , Paul M. Matthews , Declan P O Regan , Wenjia Bai

Patient-specific computational models of the heart are powerful tools for cardiovascular research and medicine, with demonstrated applications in treatment planning, device evaluation, and surgical decision-making. Yet constructing such…

Medical Physics · Physics 2026-04-21 Aaron L. Brown , Ju Liu , Daniel B. Ennis , Alison L. Marsden