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Obtaining a relevant dataset is central to conducting empirical studies in software engineering. However, in the context of mining software repositories, the lack of appropriate tooling for large scale mining tasks hinders the creation of…
Photonic quantum computers use the bosonic statistics of photons to construct, through quantum interference, the large entangled states required for measurement-based quantum computation. Therefore, any which-way information present in the…
PymePix is a new Python 3 library that provides control and acquisition for the Timepix3-SPIDR hardware. The rich set of data-structures and intuitive routines reduces time and coding effort to quickly configure, acquire, and visualize data…
Astronomy is entering the era of large surveys of the variable sky such as Zwicky Transient Facility (ZTF) and the forthcoming Legacy Survey of Space and Time (LSST) which are intended to produce up to a million alerts per night. Such an…
We present PyWiFeS, a new Python-based data reduction pipeline for the Wide Field Spectrograph (WiFeS). PyWiFeS consists of a series of core data processing routines built on standard scientific Python packages commonly used in astronomical…
TorchOptics is an open-source Python library for differentiable Fourier optics simulations, developed using PyTorch to enable GPU-accelerated tensor computations and automatic differentiation. It provides a comprehensive framework for…
POLEVAL provides a software toolbox for collaborative, persistent and reproducible analysis of XPS experiments. It allows to treat, analyse and visualise the results of an extended experimental campaign in a single python notebook in a…
High-level I/O libraries, such as HDF5 and PnetCDF, are commonly used by large-scale scientific applications to perform I/O tasks in parallel. These I/O libraries store the metadata such as data types and dimensionality along with the raw…
Raman spectroscopy is a non-destructive and label-free chemical analysis technique, which plays a key role in the analysis and discovery cycle of various branches of science. Nonetheless, progress in Raman spectroscopic analysis is still…
Raw data sizes are growing and proliferating in scientific research, driven by the success of data-hungry computational methods, such as machine learning. The preponderance of proprietary and shoehorned data formats make computations slower…
Recent advances in diffusion-based generative models have shown incredible promise for zero shot image-to-image translation and editing. Most of these approaches work by combining or replacing network-specific features used in the…
Summary: Biospectrogam is an open-source software for the spectral analysis of DNA and protein sequences. The software can fetch (from NCBI server), import and manage biological data. One can analyze the data using Digital Signal Processing…
We present the first stable release of Halotools (v0.2), a community-driven Python package designed to build and test models of the galaxy-halo connection. Halotools provides a modular platform for creating mock universes of galaxies…
Photons are a ubiquitous carrier of quantum information: they are fast, suffer minimal decoherence, and do not require huge cryogenic facilities. Nevertheless, their intrinsically weak photon-photon interactions remain a key obstacle to…
The quantum state of a single photon stands among the most fundamental and intriguing manifestations of quantum physics. At the same time single photons and pairs of single photons are important building blocks in the fields of linear…
Background: Digital Image Correlation (DIC) is a widely used full-field measurement technique, but both open-source and commercial packages often have limitations such as operating-system restrictions, lack of support for deployment on…
We present PyWolf, an open-source software capable of performing numerical simulations of partially coherent light propagation from two-dimensional light sources. PyWolf computes the evolution of a user-defined cross-spectral density…
Photoacoustic (PA) imaging systems based on clinical linear ultrasound arrays have become increasingly popular in translational PA research. Such systems can be more easily integrated in a clinical workflow due to the simultaneous access to…
Providing high-quality electron images and hyperspectral X-ray maps is a focus of many modern electron microscopy laboratories. Nevertheless, further image processing and annotations are often needed to prepare them for publications and…
We introduce ProcFunc, a library for Blender-based procedural 3D generation in Python. ProcFunc provides a library of easy-to-use Python functions, which streamline creating, combining, analyzing, and executing procedural generation code.…