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Related papers: Explainability in Graph Neural Networks: An Experi…

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Graph neural networks (GNNs) are increasingly used to model complex patterns in graph-structured data. However, enabling them to "forget" designated information remains challenging, especially under privacy regulations such as the GDPR.…

Machine Learning · Computer Science 2025-12-09 Imran Ahsan , Hyunwook Yu , Jinsung Kim , Mucheol Kim

The problem of interpreting the decisions of machine learning is a well-researched and important. We are interested in a specific type of machine learning model that deals with graph data called graph neural networks. Evaluating…

Machine Learning · Computer Science 2022-06-29 Mandeep Rathee , Thorben Funke , Avishek Anand , Megha Khosla

Despite their success in various domains, the growing dependence on GNNs raises a critical concern about the nature of the combinatorial reasoning underlying their predictions, which is often hidden within their black-box architectures.…

Machine Learning · Computer Science 2026-03-03 Yue Niu , Zhaokai Sun , Jiayi Yang , Xiaofeng Cao , Rui Fan , Xin Sun , Hanli Wang , Wei Ye

While graph neural networks (GNNs) have shown remarkable performance across diverse graph-related tasks, their high-dimensional hidden representations render them black boxes. In this work, we propose Graph Lingual Network (GLN), a GNN…

Machine Learning · Computer Science 2025-09-16 Sunwoo Kim , Soo Yong Lee , Jaemin Yoo , Kijung Shin

Graph Convolutional Neural Networks (GCNN) are becoming a preferred model for data processing on irregular domains, yet their analysis and principles of operation are rarely examined due to the black box nature of NNs. To this end, we…

Machine Learning · Computer Science 2021-08-25 Ljubisa Stankovic , Danilo Mandic

Historically, materials informatics has relied on human-designed descriptors of materials structures. In recent years, graph neural networks (GNNs) have been proposed for learning representations of crystal structures from data end-to-end…

Materials Science · Physics 2023-03-29 Sheng Gong , Tian Xie , Yang Shao-Horn , Rafael Gomez-Bombarelli , Jeffrey C. Grossman

Recently, Graph Neural Networks (GNNs) have significantly advanced the performance of machine learning tasks on graphs. However, this technological breakthrough makes people wonder: how does a GNN make such decisions, and can we trust its…

Machine Learning · Computer Science 2024-02-26 Xiaoqi Wang , Han-Wei Shen

Graph Neural Networks (GNNs) have become an effective tool for malware detection by capturing program execution through graph-structured representations. However, important challenges remain regarding scalability, interpretability, and the…

Cryptography and Security · Computer Science 2025-11-27 Hossein Shokouhinejad , Griffin Higgins , Roozbeh Razavi-Far , Ali A. Ghorbani

Self-explainable deep neural networks are a recent class of models that can output ante-hoc local explanations that are faithful to the model's reasoning, and as such represent a step forward toward filling the gap between expressiveness…

Machine Learning · Computer Science 2023-08-30 Marc Christiansen , Lea Villadsen , Zhiqiang Zhong , Stefano Teso , Davide Mottin

The exploration of Graph Neural Networks (GNNs) for processing graph-structured data has expanded, particularly their potential for causal analysis due to their universal approximation capabilities. Anticipated to significantly enhance…

Machine Learning · Computer Science 2024-01-30 Simi Job , Xiaohui Tao , Taotao Cai , Lin Li , Haoran Xie , Jianming Yong

Recent advancements in graph learning have revolutionized the way to understand and analyze data with complex structures. Notably, Graph Neural Networks (GNNs), i.e. neural network architectures designed for learning graph representations,…

Machine Learning · Computer Science 2024-07-09 Yu Huang , Min Zhou , Menglin Yang , Zhen Wang , Muhan Zhang , Jie Wang , Hong Xie , Hao Wang , Defu Lian , Enhong Chen

Deep learning has revolutionized many machine learning tasks in recent years, ranging from image classification and video processing to speech recognition and natural language understanding. The data in these tasks are typically represented…

Machine Learning · Computer Science 2020-03-27 Zonghan Wu , Shirui Pan , Fengwen Chen , Guodong Long , Chengqi Zhang , Philip S. Yu

Graph Neural Networks (GNNs) have achieved outstanding performance across a wide range of graph-related tasks. However, their "black-box" nature poses significant challenges to their explainability, and existing methods often fail to…

Machine Learning · Computer Science 2025-07-25 Lijun Wu , Dong Hao , Zhiyi Fan

Recent advancements in machine learning and signal processing domains have resulted in an extensive surge of interest in Deep Neural Networks (DNNs) due to their unprecedented performance and high accuracy for different and challenging…

Machine Learning · Computer Science 2021-02-04 Atefeh Shahroudnejad

Vulnerability detection is crucial for ensuring the security and reliability of software systems. Recently, Graph Neural Networks (GNNs) have emerged as a prominent code embedding approach for vulnerability detection, owing to their ability…

Software Engineering · Computer Science 2024-07-16 Zhaoyang Chu , Yao Wan , Qian Li , Yang Wu , Hongyu Zhang , Yulei Sui , Guandong Xu , Hai Jin

Lots of learning tasks require dealing with graph data which contains rich relation information among elements. Modeling physics systems, learning molecular fingerprints, predicting protein interface, and classifying diseases demand a model…

Machine Learning · Computer Science 2021-10-07 Jie Zhou , Ganqu Cui , Shengding Hu , Zhengyan Zhang , Cheng Yang , Zhiyuan Liu , Lifeng Wang , Changcheng Li , Maosong Sun

Deep neural networks (DNNs) have become a proven and indispensable machine learning tool. As a black-box model, it remains difficult to diagnose what aspects of the model's input drive the decisions of a DNN. In countless real-world…

Machine Learning · Computer Science 2021-09-14 Gabrielle Ras , Ning Xie , Marcel van Gerven , Derek Doran

Artificial neural networks are often very complex and too deep for a human to understand. As a result, they are usually referred to as black boxes. For a lot of real-world problems, the underlying pattern itself is very complicated, such…

Machine Learning · Computer Science 2020-11-26 Yang Li

Dementia is a progressive neurodegenerative disorder with multiple etiologies, including Alzheimer's disease, Parkinson's disease, frontotemporal dementia, and vascular dementia. Its clinical and biological heterogeneity makes diagnosis and…

Machine Learning · Computer Science 2025-09-24 Niharika Tewari , Nguyen Linh Dan Le , Mujie Liu , Jing Ren , Ziqi Xu , Tabinda Sarwar , Veeky Baths , Feng Xia

Graph neural networks (GNNs) are popular machine learning models for graphs with many applications across scientific domains. However, GNNs are considered black box models, and it is challenging to understand how the model makes…

Machine Learning · Computer Science 2025-01-20 Selahattin Akkas , Ariful Azad
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