English
Related papers

Related papers: Improved estimation for energy dissipation in bioc…

200 papers

We investigate energy transfer and localization in a linear time-invariant oscillator chain weakly coupled to a forced nonlinear actuator. Two types of perturbation are studied: (1) harmonic forcing with a constant frequency is applied to…

Pattern Formation and Solitons · Physics 2015-01-06 Agnessa Kovaleva

The current investigation focuses on detailed analysis of the anchor based optimization approach (ABOA), its comparison with alternative global fitting protocols and on the global analysis of the truncation of basis effects in the…

Nuclear Theory · Physics 2024-06-05 A. Taninah , B. Osei , A. V. Afanasjev , U. Perera , S. Teeti

We investigate collective dissipative properties of vibrated granular materials by means of molecular dynamics simulations. Rates of energy losses indicate three different regimes or "phases"in the amplitude-frequency plane of the external…

Materials Science · Physics 2009-10-31 Clara Saluena , Thorsten Poeschel , Sergei E. Esipov

We study a stochastic model of gene expression, in which protein production has a form of random bursts whose size distribution is arbitrary, whereas protein decay is a first-order reaction. We find exact analytical expressions for the time…

Biological Physics · Physics 2016-09-21 Jakub Jędrak , Anna Ochab-Marcinek

The conversion of an absorbed photon from the exciton energy into the reaction centre in the photosynthetic complex has a near unit efficiency. It is becoming clear that any classical model, where the exciton hopping is modeled by a…

Quantum Physics · Physics 2010-06-21 Vlatko Vedral , Tristan Farrow

The quantum harmonic oscillator is the fundamental building block to compute thermal properties of virtually any dielectric crystal at low temperatures in terms of phonons, extended further to cases with anharmonic couplings, or even…

Statistical Mechanics · Physics 2021-10-05 Vladislav Efremkin , Jean-Louis Barrat , Stefano Mossa , Markus Holzmann

If a contact of two purely elastic bodies with no sliding (infinite coefficient of friction) is subjected to superimposed oscillations in the normal and tangential directions, then a specific damping appears, that is not dependent on…

Soft Condensed Matter · Physics 2015-12-29 M. Popov , V. L. Popov , R. Pohrt

We present an accurate local density-functional for electronic-structure calculations within the density functional theory (DFT). The functional is derived by analyzing the structure of the standard perturbative expansion of the correlation…

Materials Science · Physics 2024-11-28 Mario Benites , Angel Rosado , Efstratios Manousakis

We investigate a nonequilibrium donor-acceptor quantum rectifier system coupled to an anharmonic vibrational mode, treating the vibrational dynamics both as a two-level system and as multilevel system. The time-dependent Fischer information…

Quantum Physics · Physics 2025-05-30 Bitap Raj Thakuria , Trishna Kalita , Javed Akhtar , Himangshu Prabal Goswami

The Vlasov equation embodies the smooth field approximation of the self-consistent equation of motion for charged particle beams. This framework is fundamentally altered if we include the fluctuating forces that originate from the actual…

Accelerator Physics · Physics 2023-04-26 Jürgen Struckmeier

We investigate how the transport properties of a united atoms fluid with a dissipative particle dynamics thermostat depend on the functional form and magnitude of both the conservative and the stochastic interactions. We demonstrate how the…

Chemical Physics · Physics 2009-11-13 Anders Eriksson , Martin Nilsson Jacobi , Johan Nyström , Kolbjørn Tunstrøm

We consider a standard optomechanical system where a mechanical oscillator is coupled to a cavity mode through the radiation pressure interaction. The oscillator is coherently driven at its resonance frequency, whereas the cavity mode is…

Mesoscale and Nanoscale Physics · Physics 2019-03-01 Kjetil Borkje

Nearly all circadian clocks maintain a period that is insensitive to temperature changes, a phenomenon known as temperature compensation (TC). Yet, it is unclear whether there is any common feature among different systems that exhibit TC.…

Molecular Networks · Quantitative Biology 2024-01-26 Haochen Fu , Chenyi Fei , Qi Ouyang , Yuhai Tu

We study by means of numerical simulations the model of dissipative particle dynamics with energy conservation for the simple case of thermal conduction. It is shown that the model displays correct equilibrium fluctuations and reproduces…

Statistical Mechanics · Physics 2016-08-31 Marisol Ripoll , Pep Español , Matthieu H. Ernst

A general condition for sharp transition of decay rate from quantum to thermal regimes is derived in dissipative tunneling models when position dependent mass is involved. It is shown that the effect of dissipation in general changes the…

High Energy Physics - Theory · Physics 2009-10-31 Soo-Young lee , Hungsoo Kim , D. K. Park , Chang Soo Park , Jae Kwan Kim

For most stochastic dynamical systems, variables which are tightly regulated tend to respond slowly to external changes. This idea is often discussed for applicable systems, within a linear response regime, through the Fluctuation…

General Physics · Physics 2017-11-15 Nash Rochman , Sean X. Sun

We derive the exact expression for the resonant frequency of the time-averaged steady-state energy and show that this frequency is excellently approximated by the arithmetic mean of the amplitude and velocity resonant frequencies. In…

Classical Physics · Physics 2025-01-10 Karlo Lelas , Nikola Poljak

Complex frequency excitations, oscillating signals whose amplitude decreases exponentially in time, have recently been demonstrated to significantly increase the effective quality factor of mechanical resonators. In this work, we…

Classical Physics · Physics 2026-05-14 Wenbo Li , Raj Kumar Pal

The problem of estimating the frequency of a two-level atom in a noisy environment is studied. Our interest is to minimise both the energetic cost of the protocol and the statistical uncertainty of the estimate. In particular, we prepare a…

We show that the energetics and lifetimes of resonances of finite systems under an external electric field can be captured by Kohn--Sham density functional theory (DFT) within the formalism of uniform complex scaling. Properties of…