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The integration of multi-omic data is pivotal for understanding complex diseases, but its high dimensionality and noise present significant challenges. Graph Neural Networks (GNNs) offer a robust framework for analyzing large-scale…

Quantitative Methods · Quantitative Biology 2024-12-23 Heming Zhang , Di Huang , Yixin Chen , Fuhai Li

Do current large language models (LLMs) better solve graph reasoning and generation tasks with parameter updates? In this paper, we propose InstructGraph, a framework that empowers LLMs with the abilities of graph reasoning and generation…

Computation and Language · Computer Science 2024-02-15 Jianing Wang , Junda Wu , Yupeng Hou , Yao Liu , Ming Gao , Julian McAuley

In this paper we attempt to address the problem of geometric multi-model fitting with resorting to a few weakly annotated (WA) data points, which has been sparsely studied so far. In weak annotating, most of the manual annotations are…

Computer Vision and Pattern Recognition · Computer Science 2020-01-22 Chao Zhang , Xuequan Lu , Katsuya Hotta , Xi Yang

In the graph domain, deep graph networks based on Message Passing Neural Networks (MPNNs) or Graph Transformers often cause over-smoothing of node features, limiting their expressive capacity. Many upsampling techniques involving node and…

Machine Learning · Computer Science 2026-02-03 Xiaotang Wang , Yun Zhu , Haizhou Shi , Yongchao Liu , Yongqi Zhang

`Linguistic annotation' covers any descriptive or analytic notations applied to raw language data. The basic data may be in the form of time functions - audio, video and/or physiological recordings - or it may be textual. The added…

Computation and Language · Computer Science 2007-05-23 Steven Bird , Mark Liberman

We introduce a new method to improve existing multilingual sentence embeddings with Abstract Meaning Representation (AMR). Compared with the original textual input, AMR is a structured semantic representation that presents the core concepts…

Computation and Language · Computer Science 2022-10-19 Deng Cai , Xin Li , Jackie Chun-Sing Ho , Lidong Bing , Wai Lam

As AI models grow more complex, explainability is essential for building trust, yet concept-based counterfactual methods still face a trade-off between expressivity and efficiency. Representing underlying concepts as atomic sets is fast but…

Artificial Intelligence · Computer Science 2026-05-22 Angeliki Dimitriou , Nikolaos Chaidos , Maria Lymperaiou , Giorgos Filandrianos , Giorgos Stamou

Recent advances in neural architectures have revived the problem of morphological rule learning. We evaluate the Transformer as a model of morphological rule learning and compare it with Recurrent Neural Networks (RNN) on English, German,…

Computation and Language · Computer Science 2021-05-11 Deniz Beser

Pretrained multilingual large language models have typically used heuristic temperature-based sampling to balance between different languages. However previous work has not systematically evaluated the efficacy of different pretraining…

Computation and Language · Computer Science 2023-04-19 Hyung Won Chung , Noah Constant , Xavier Garcia , Adam Roberts , Yi Tay , Sharan Narang , Orhan Firat

An extended, revised form of Tim Buckwalter's Arabic lexical and morphological resource AraMorph, eXtended Revised AraMorph (henceforth XRAM), is presented which addresses a number of weaknesses and inconsistencies of the original model by…

Computation and Language · Computer Science 2016-03-08 Giuliano Lancioni , Valeria Pettinari , Laura Garofalo , Marta Campanelli , Ivana Pepe , Simona Olivieri , Ilaria Cicola

In this extended abstract, we present a simple approach to convergence on term graphs that allows us to unify term graph rewriting and infinitary term rewriting. This approach is based on a partial order and a metric on term graphs. These…

Logic in Computer Science · Computer Science 2013-02-27 Patrick Bahr

Facial Expression Recognition (FER) suffers from data uncertainties caused by ambiguous facial images and annotators' subjectiveness, resulting in excursive semantic and feature covariate shifting problem. Existing works usually correct…

Computer Vision and Pattern Recognition · Computer Science 2022-07-25 Yangtao Du , Qingqing Wang , Yujie Xiong

The HuggingFace Datasets Hub hosts thousands of datasets, offering exciting opportunities for language model training and evaluation. However, datasets for a specific task type often have different schemas, making harmonization challenging.…

Computation and Language · Computer Science 2023-05-17 Damien Sileo

The use of Deep Neural Network architectures for Language Modeling has recently seen a tremendous increase in interest in the field of NLP with the advent of transfer learning and the shift in focus from rule-based and predictive models…

Computation and Language · Computer Science 2019-12-04 Octavia-Maria Sulea , Steve Young

One of the most prominent tools for abstract argumentation is the Dung's framework, AF for short. It is accompanied by a variety of semantics including grounded, complete, preferred and stable. Although powerful, AFs have their…

Artificial Intelligence · Computer Science 2014-05-05 Sylwia Polberg

Among the most general structures extending the framework by Dung are the abstract dialectical frameworks (ADFs). They come equipped with various types of semantics, with the most prominent - the labeling-based one - analyzed in the context…

Artificial Intelligence · Computer Science 2016-07-05 Sylwia Polberg

Given the ubiquity of graph data and its applications in diverse domains, building a Graph Foundation Model (GFM) that can work well across different graphs and tasks with a unified backbone has recently garnered significant interests. A…

Machine Learning · Computer Science 2024-06-18 Zhikai Chen , Haitao Mao , Jingzhe Liu , Yu Song , Bingheng Li , Wei Jin , Bahare Fatemi , Anton Tsitsulin , Bryan Perozzi , Hui Liu , Jiliang Tang

We present an extension-based approach for computing and verifying preferences in an abstract argumentation system. Although numerous argumentation semantics have been developed previously for identifying acceptable sets of arguments from…

Artificial Intelligence · Computer Science 2024-03-27 Quratul-ain Mahesar , Nir Oren , Wamberto W. Vasconcelos

In the health domain, decisions are often based on different data modalities. Thus, when creating prediction models, multimodal fusion approaches that can extract and combine relevant features from different data modalities, can be highly…

Artificial Intelligence · Computer Science 2024-02-20 Mafalda Malafaia , Thalea Schlender , Peter A. N. Bosman , Tanja Alderliesten

While label fusion from multiple noisy annotations is a well understood concept in data wrangling (tackled for example by the Dawid-Skene (DS) model), we consider the extended problem of carrying out learning when the labels themselves are…

Machine Learning · Statistics 2020-08-10 Michael P. J. Camilleri , Christopher K. I. Williams