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Related papers: MoReL: Multi-omics Relational Learning

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While graph neural networks (GNNs) have achieved great success in learning from graph-structured data, their reliance on local, pairwise message passing restricts their ability to capture complex, high-order subgraph patterns. leading to…

Machine Learning · Computer Science 2025-09-12 Junda Ye , Zhongbao Zhang , Li Sun , Siqiang Luo

Multi-graph multi-label learning (\textsc{Mgml}) is a supervised learning framework, which aims to learn a multi-label classifier from a set of labeled bags each containing a number of graphs. Prior techniques on the \textsc{Mgml} are…

Machine Learning · Computer Science 2020-12-22 Yejiang Wang , Yuhai Zhao , Zhengkui Wang , Chengqi Zhang

Motivated by the computational and storage challenges that dense embeddings pose, we introduce the problem of latent network summarization that aims to learn a compact, latent representation of the graph structure with dimensionality that…

Social and Information Networks · Computer Science 2019-06-24 Di Jin , Ryan Rossi , Danai Koutra , Eunyee Koh , Sungchul Kim , Anup Rao

Multimodal-attributed graphs (MAGs) are a fundamental data structure for multimodal graph learning (MGL), enabling both graph-centric and modality-centric tasks. However, our empirical analysis reveals inherent topology quality limitations…

Machine Learning · Computer Science 2026-03-31 Yinlin Zhu , Xunkai Li , Di Wu , Wang Luo , Miao Hu , Di Wu

Since Multimodal Emotion Recognition in Conversation (MERC) can be applied to public opinion monitoring, intelligent dialogue robots, and other fields, it has received extensive research attention in recent years. Unlike traditional…

Machine Learning · Computer Science 2024-07-25 Tao Meng , Fuchen Zhang , Yuntao Shou , Hongen Shao , Wei Ai , Keqin Li

Multi-view learning has progressed rapidly in recent years. Although many previous studies assume that each instance appears in all views, it is common in real-world applications for instances to be missing from some views, resulting in…

Machine Learning · Computer Science 2022-08-30 Pengfei Zhu , Xinjie Yao , Yu Wang , Meng Cao , Binyuan Hui , Shuai Zhao , Qinghua Hu

Graph neural networks (GNNs) have demonstrated promising performance across various chemistry-related tasks. However, conventional graphs only model the pairwise connectivity in molecules, failing to adequately represent higher-order…

Chemical Physics · Physics 2023-12-22 Junwu Chen , Philippe Schwaller

Cellular mechanism-of-action is of fundamental concern in many biological studies. It is of particular interest for identifying the cause of disease and learning the way in which treatments act against disease. However, pinpointing such…

Methodology · Statistics 2016-10-04 Paula J. Griffin , W. Evan Johnson , Eric D. Kolaczyk

Molecular generation plays an important role in drug discovery and materials science, especially in data-scarce scenarios where traditional generative models often struggle to achieve satisfactory conditional generalization. To address this…

Machine Learning · Computer Science 2025-05-13 Zimo Yan , Jie Zhang , Zheng Xie , Chang Liu , Yizhen Liu , Yiping Song

Recent years have seen a rapid growth of utilizing graph neural networks (GNNs) in the biomedical domain for tackling drug-related problems. However, like any other deep architectures, GNNs are data hungry. While requiring labels in real…

Biological Physics · Physics 2022-05-03 Mengying Sun , Jing Xing , Huijun Wang , Bin Chen , Jiayu Zhou

Brain networks has attracted the interests of many neuroscientists. From functional MRI (fMRI) data, statistical tools have been developed to recover brain networks. However, the dimensionality of whole-brain fMRI, usually in hundreds of…

Methodology · Statistics 2014-04-08 Xi Luo

Network analysis is rapidly becoming a standard tool for studying functional magnetic resonance imaging (fMRI) data. In this framework, different brain areas are mapped to the nodes of a network, whose links depict functional dependencies…

Neurons and Cognition · Quantitative Biology 2017-05-30 Rainer Kujala , Enrico Glerean , Raj Kumar Pan , Iiro P. Jääskeläinen , Mikko Sams , Jari Saramäki

Beam selection for millimeter-wave links in a vehicular scenario is a challenging problem, as an exhaustive search among all candidate beam pairs cannot be assuredly completed within short contact times. We solve this problem via a novel…

Realistic physical systems are characterised by emergent interactions across multiple length and time scales, posing a significant challenge for predictive machine learning (ML) models. Most scientific ML models focus on a narrow range of…

Multi-relational graph is a ubiquitous and important data structure, allowing flexible representation of multiple types of interactions and relations between entities. Similar to other graph-structured data, link prediction is one of the…

Graph-structured data is a type of data to be obtained associated with a graph structure where vertices and edges describe some kind of data correlation. This paper proposes a regression method on graph-structured data, which is based on…

Machine Learning · Computer Science 2025-05-23 Ayano Nakai-Kasai , Tadashi Wadayama

Various data modalities are common in real-world applications (e.g., electronic health records, medical images and clinical notes in healthcare). It is essential to develop multimodal learning methods to aggregate various information from…

Machine Learning · Computer Science 2025-11-06 Feng Wu , Tsai Hor Chan , Fuying Wang , Guosheng Yin , Lequan Yu

Recent advances in machine learning (ML) have expedited materials discovery and design. One significant challenge faced in ML for materials is the expansive combinatorial space of potential materials formed by diverse constituents and their…

Machine Learning · Computer Science 2024-06-13 Hengrui Zhang , Jie Chen , James M. Rondinelli , Wei Chen

Data for several applications in diverse fields can be represented as multiple matrices that are linked across rows or columns. This is particularly common in molecular biomedical research, in which multiple molecular "omics" technologies…

Machine Learning · Statistics 2024-08-02 Eric F. Lock

Multimodal data pervades various domains, including healthcare, social media, and transportation, where multimodal graphs play a pivotal role. Machine learning on multimodal graphs, referred to as multimodal graph learning (MGL), is…

Machine Learning · Computer Science 2024-02-09 Ciyuan Peng , Jiayuan He , Feng Xia
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