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Bayesian structure learning is the NP-hard problem of discovering a Bayesian network that optimally represents a given set of training data. In this paper we study the computational worst-case complexity of exact Bayesian structure learning…
Given an $n$-vertex non-negatively real-weighted graph $G$, whose vertices are partitioned into a set of $k$ clusters, a \emph{clustered network design problem} on $G$ consists of solving a given network design optimization problem on $G$,…
Surface parameterizations are widely applied in computer graphics, medical imaging and transformation optics. In this paper, we rigorously derive the gradient vector and Hessian matrix of the discrete conformal energy for spherical…
We study the computational complexity of the problem $\#\text{IndSub}(\Phi)$ of counting $k$-vertex induced subgraphs of a graph $G$ that satisfy a graph property $\Phi$. Our main result establishes an exhaustive and explicit classification…
We investigate how efficiently a well-studied family of domination-type problems can be solved on bounded-treewidth graphs. For sets $\sigma,\rho$ of non-negative integers, a $(\sigma,\rho)$-set of a graph $G$ is a set $S$ of vertices such…
Exact pattern matching in labeled graphs is the problem of searching paths of a graph $G=(V,E)$ that spell the same string as the pattern $P[1..m]$. This basic problem can be found at the heart of more complex operations on variation graphs…
$H$-Packing is the problem of finding a maximum number of vertex-disjoint copies of $H$ in a given graph $G$. $H$-Partition is the special case of finding a set of vertex-disjoint copies that cover each vertex of $G$ exactly once. Our goal…
In the Densest k-Subgraph problem, given a graph G and a parameter k, one needs to find a subgraph of G induced on k vertices that contains the largest number of edges. There is a significant gap between the best known upper and lower…
We contribute an approach to the problem of locally computing sparse connected subgraphs of dense graphs. In this setting, given an edge in a connected graph $G = (V, E)$, an algorithm locally decides its membership in a sparse connected…
In the Densest $k$-Subgraph problem, given an undirected graph $G$ and an integer $k$, the goal is to find a subgraph of $G$ on $k$ vertices that contains maximum number of edges. Even though the state-of-the-art algorithm for the problem…
The subset sum problem is one of the simplest and most fundamental NP-hard problems in combinatorial optimization. We consider two extensions of this problem: The subset sum problem with digraph constraint (SSG) and subset sum problem with…
There has been recent progress in showing that the exponential dependence on treewidth in dynamic programming algorithms for solving NP-hard problems are optimal under the Strong Exponential Time Hypothesis (SETH). We extend this work to…
We describe algorithms to efficiently compute minimum $(s,t)$-cuts and global minimum cuts of undirected surface-embedded graphs. Given an edge-weighted undirected graph $G$ with $n$ vertices embedded on an orientable surface of genus $g$,…
The problem of deciding the validity (QSAT) of quantified Boolean formulas (QBF) is a vivid research area in both theory and practice. In the field of parameterized algorithmics, the well-studied graph measure treewidth turned out to be a…
A cut of a graph can be represented in many different ways. Here we propose to represent a cut through a ``relation tree'', which is a spanning tree with signed edges. We show that this picture helps to classify the main greedy heuristics…
We prove that unless the Exponential Time Hypothesis (ETH) fails, deciding if there is a homomorphism from graph $G$ to graph $H$ cannot be done in time $|V(H)|^{o(|V(G)|)}$. We also show an exponential-time reduction from Graph…
Given a graph $G = (V,E)$, a threshold function $t~ :~ V \rightarrow \mathbb{N}$ and an integer $k$, we study the Harmless Set problem, where the goal is to find a subset of vertices $S \subseteq V$ of size at least $k$ such that every…
The \emph{maximal $k$-edge-connected subgraphs} problem is a classical graph clustering problem studied since the 70's. Surprisingly, no non-trivial technique for this problem in weighted graphs is known: a very straightforward…
The Sum-of-Squares (SoS) hierarchy of semidefinite programs is a powerful algorithmic paradigm which captures state-of-the-art algorithmic guarantees for a wide array of problems. In the average case setting, SoS lower bounds provide strong…
For the vertex selection problem $(\sigma,\rho)$-DomSet one is given two fixed sets $\sigma$ and $\rho$ of integers and the task is to decide whether we can select vertices of the input graph such that, for every selected vertex, the number…