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This dissertation explores applications of discrete geometry in mathematical neuroscience. We begin with convex neural codes, which model the activity of hippocampal place cells and other neurons with convex receptive fields. In Chapter 4,…

Neurons and Cognition · Quantitative Biology 2022-09-19 Caitlin Lienkaemper

Geometric modeling by constraints, whose applications are of interest to communities from various fields such as mechanical engineering, computer aided design, symbolic computation or molecular chemistry, is now integrated into standard…

Computational Geometry · Computer Science 2018-03-06 Samy Ait-Aoudia , Adel Moussaoui , Khaled Abid , Dominique Michelucci

Tolerance graphs model interval relations in such a way that intervals can tolerate a certain degree of overlap without being in conflict. This subclass of perfect graphs has been extensively studied, due to both its interesting structure…

Computational Complexity · Computer Science 2010-02-03 George B. Mertzios , Ignasi Sau , Shmuel Zaks

In this paper we study locally chordal graphs, i.e. graphs where every small-radius ball is chordal. We prove four characterizations of locally chordal graphs. Two are counterparts of the classic descriptions of chordal graphs via induced…

Combinatorics · Mathematics 2025-12-23 Tara Abrishami , Paul Knappe , Jonas Kobler

The Graph Reconstruction Conjecture famously posits that any undirected graph on at least three vertices is determined up to isomorphism by its family of (unlabeled) induced subgraphs. At present, the conjecture admits partial resolutions…

Discrete Mathematics · Computer Science 2025-12-03 Julian Asilis , Xi Chen , Dutch Hansen , Shang-Hua Teng

Slimness of a graph measures the local deviation of its metric from a tree metric. In a graph $G=(V,E)$, a geodesic triangle $\bigtriangleup(x,y,z)$ with $x, y, z\in V$ is the union $P(x,y) \cup P(x,z) \cup P(y,z)$ of three shortest paths…

Discrete Mathematics · Computer Science 2023-06-22 Feodor F. Dragan , Abdulhakeem Mohammed

We investigate graphs that can be represented as vertex intersections of horizontal and vertical paths in a grid, the so called $B_0$-VPG graphs. Recognizing this class is an NP-complete problem. Although, there exists a polynomial time…

Combinatorics · Mathematics 2015-11-02 L. Alcón , F. Bonomo , M. P. Mazzoleni

We consider when automorphisms of a graph can be induced by homeomorphisms of embeddings of the graph in a $3$-manifold. In particular, we prove that every automorphism of a graph is induced by a homeomorphism of some embedding of the graph…

Geometric Topology · Mathematics 2021-12-15 Erica Flapan , Song Yu

We investigate the parameterized complexity of the recognition problem for the proper $H$-graphs. The $H$-graphs are the intersection graphs of connected subgraphs of a subdivision of a multigraph $H$, and the properness means that the…

Computational Complexity · Computer Science 2020-11-25 Steven Chaplick , Petr A. Golovach , Tim A. Hartmann , Dušan Knop

We relate star colouring of even-degree regular graphs to the notions of locally constrained graph homomorphisms to the oriented line graph $ \vec{L}(K_q) $ of the complete graph $ K_q $ and to its underlying undirected graph $ L^*(K_q) $.…

Combinatorics · Mathematics 2025-05-08 Cyriac Antony , Shalu M. A

Mutual visibility in graphs requires pairs of vertices to be connected by shortest paths that avoid all other vertices of a prescribed set, a condition that is often overly restrictive. In this paper, we introduce a new variant, called…

Combinatorics · Mathematics 2026-03-04 Tonny K B , Shikhi M

Graph transformations definable in logic can be described using the notion of transductions. By understanding transductions as a basic embedding mechanism, which captures the possibility of encoding one graph in another graph by means of…

Combinatorics · Mathematics 2025-01-09 Michał Pilipczuk

An orientation $D$ of a graph $G=(V,E)$ is a digraph obtained from $G$ by replacing each edge by exactly one of the two possible arcs with the same end vertices. For each $v \in V(G)$, the indegree of $v$ in $D$, denoted by $d^-_D(v)$, is…

Computational Complexity · Computer Science 2020-12-01 Julio Araujo , Alexandre Cezar , Carlos V. G. C. Lima , Vinicius F. dos Santos , Ana Silva

Semi-supervised learning on graph structured data has received significant attention with the recent introduction of Graph Convolution Networks (GCN). While traditional methods have focused on optimizing a loss augmented with Laplacian…

Machine Learning · Computer Science 2019-01-04 Prateek Yadav , Madhav Nimishakavi , Naganand Yadati , Shikhar Vashishth , Arun Rajkumar , Partha Talukdar

We introduce a new subclass of chordal graphs that generalizes split graphs, which we call well-partitioned chordal graphs. Split graphs are graphs that admit a partition of the vertex set into cliques that can be arranged in a star…

Combinatorics · Mathematics 2020-02-26 Jungho Ahn , Lars Jaffke , O-joung Kwon , Paloma T. Lima

Let $G$ be a group. The directed endomorphism graph, \dend of $G$ is a directed graph with vertex set $G$ and there is a directed edge from the vertex `$a$' to the vertex `$\, b$' $(a \neq b) $ if and only if there exists an endomorphism on…

Combinatorics · Mathematics 2025-12-16 Midhuna V Ajith , Mainak Ghosh , Aparna Lakshmanan S

Three new combinations of convex bodies are introduced and studied: the $L_p$ fiber, $L_p$ chord and graph combinations. These combinations are defined in terms of the fibers and graphs of pairs of convex bodies, and each operation…

Metric Geometry · Mathematics 2025-09-10 Steven Hoehner , Sudan Xing

We investigate the property of a spatial graph of having a leveled embedding and characterize the abstract graphs with this property. We show that all leveled embeddings are free and we compare leveled and paneled (also known as flat)…

Combinatorics · Mathematics 2025-09-22 Senja Barthel , Fabio Buccoliero

The simple graphs $G=(V,E)$ that satisfy $|E'|\leq 2|V'|-l$ for any subgraph (and for $l=1,2,3$) are the $(2,l)$-sparse graphs. Those that also satisfy $|E|=2|V|-l$ are the $(2,l)$-tight graphs. These can be characterised by their…

Combinatorics · Mathematics 2012-10-17 Anthony Nixon , John Owen

A picture P of a graph G = (V,E) consists of a point P(v) for each vertex v in V and a line P(e) for each edge e in E, all lying in the projective plane over a field k and subject to containment conditions corresponding to incidence in G. A…

Combinatorics · Mathematics 2007-05-23 Jeremy L. Martin