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Graph Neural Networks (GNNs) have shown great ability in modeling graph-structured data for various domains. However, GNNs are known as black-box models that lack interpretability. Without understanding their inner working, we cannot fully…

Machine Learning · Computer Science 2022-10-06 Enyan Dai , Suhang Wang

Latent space models are powerful statistical tools for modeling and understanding network data. While the importance of accounting for uncertainty in network analysis has been well recognized, the current literature predominantly focuses on…

Statistics Theory · Mathematics 2025-08-15 Jinming Li , Shihao Wu , Chengyu Cui , Gongjun Xu , Ji Zhu

In this paper we show the similarities and differences of two deep neural networks by comparing the manifolds composed of activation vectors in each fully connected layer of them. The main contribution of this paper includes 1) a new data…

Machine Learning · Computer Science 2018-01-23 Tao Yu , Huan Long , John E. Hopcroft

The latent space model is one of the well-known methods for statistical inference of network data. While the model has been much studied for a single network, it has not attracted much attention to analyze collectively when multiple…

Methodology · Statistics 2022-08-29 Kisung You , Ilmun Kim , Ick Hoon Jin , Minjeong Jeon , Dennis Shung

The success of recent deep convolutional neural networks (CNNs) depends on learning hidden representations that can summarize the important factors of variation behind the data. However, CNNs often criticized as being black boxes that lack…

Computer Vision and Pattern Recognition · Computer Science 2018-06-27 Bolei Zhou , David Bau , Aude Oliva , Antonio Torralba

Graph Neural Networks (GNN) can capture the geometric properties of neural representations in EEG data. Here we utilise those to study how reinforcement-based motor learning affects neural activity patterns during motor planning, leveraging…

Machine Learning · Computer Science 2024-11-01 Federico Nardi , Jinpei Han , Shlomi Haar , A. Aldo Faisal

Image representations (artificial or biological) are often compared in terms of their global geometric structure; however, representations with similar global structure can have strikingly different local geometries. Here, we propose a…

Neurons and Cognition · Quantitative Biology 2025-05-19 Jenelle Feather , David Lipshutz , Sarah E. Harvey , Alex H. Williams , Eero P. Simoncelli

A central question in cognitive science is whether conceptual representations converge onto a shared manifold to support generalization, or diverge into orthogonal subspaces to minimize task interference. While prior work has discovered…

Computation and Language · Computer Science 2026-02-09 Zhimin Hu , Lanhao Niu , Sashank Varma

Graph Neural Networks (GNNs) extend the success of neural networks to graph-structured data by accounting for their intrinsic geometry. While extensive research has been done on developing GNN models with superior performance according to a…

Graphs have often been used to answer questions about the interaction between real-world entities by taking advantage of their capacity to represent complex topologies. Complex networks are known to be graphs that capture such non-trivial…

Machine Learning · Computer Science 2022-06-03 Gabriel Spadon , Jose F. Rodrigues-Jr

Despite impressive performance as evaluated on i.i.d. holdout data, deep neural networks depend heavily on superficial statistics of the training data and are liable to break under distribution shift. For example, subtle changes to the…

Computer Vision and Pattern Recognition · Computer Science 2019-03-18 Haohan Wang , Zexue He , Zachary C. Lipton , Eric P. Xing

Understanding the common topological characteristics of the human brain network across a population is central to understanding brain functions. The abstraction of human connectome as a graph has been pivotal in gaining insights on the…

Quantitative Methods · Quantitative Biology 2023-04-26 Soumya Das , D. Vijay Anand , Moo K. Chung

Recent developments in network neuroscience have highlighted the importance of developing techniques for analyzing and modeling brain networks. A particularly powerful approach for studying complex neural systems is to formulate generative…

Neurons and Cognition · Quantitative Biology 2022-09-09 Viplove Arora , Enrico Amico , Joaquín Goñi , Mario Ventresca

In common real-world robotic operations, action and state spaces can be vast and sometimes unknown, and observations are often relatively sparse. How do we learn the full topology of action and state spaces when given only few and sparse…

Machine Learning · Computer Science 2019-07-16 Lingzhi Zhang , Andong Cao , Rui Li , Jianbo Shi

Deep networks for image classification often rely more on texture information than object shape. While efforts have been made to make deep-models shape-aware, it is often difficult to make such models simple, interpretable, or rooted in…

Computer Vision and Pattern Recognition · Computer Science 2023-05-24 Rajhans Singh , Ankita Shukla , Pavan Turaga

Differential equations are a ubiquitous tool to study dynamics, ranging from physical systems to complex systems, where a large number of agents interact through a graph with non-trivial topological features. Data-driven approximations of…

Statistical Mechanics · Physics 2024-04-26 Vaiva Vasiliauskaite , Nino Antulov-Fantulin

Deep Neural Networks (DNNs) demonstrate remarkable capabilities in learning complex hierarchical data representations, but the nature of these representations remains largely unknown. Existing global explainability methods, such as Network…

Machine Learning · Computer Science 2024-01-19 Kirill Bykov , Laura Kopf , Shinichi Nakajima , Marius Kloft , Marina M. -C. Höhne

Deep neural networks trained with different architectures, objectives, and datasets have been reported to converge on similar visual representations. However, what remains unknown is which visual properties models actually converge on and…

Computer Vision and Pattern Recognition · Computer Science 2026-05-14 Florian P. Mahner , Johannes Roth , Ka Chun Lam , Michael F. Bonner , Francisco Pereira , Martin N. Hebart

We show how, given a sufficiently large point cloud sampled from an embedded 2-manifold in $\mathbb{R}^n$, we may obtain a global representation as a cell complex with vertices given by a representative subset of the point cloud. The vertex…

Numerical Analysis · Mathematics 2018-09-05 Tyrus Berry , Steven Schluchter

Learned knowledge graph representations supporting robots contain a wealth of domain knowledge that drives robot behavior. However, there does not exist an inference reconciliation framework that expresses how a knowledge graph…

Artificial Intelligence · Computer Science 2022-05-05 Angel Daruna , Devleena Das , Sonia Chernova
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