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We propose a new, modular, open-source, Python-based 3D+time fMRI data simulation software, \emph{SNAKE-fMRI}, which stands for \emph{S}imulator from \emph{N}eurovascular coupling to \emph{A}cquisition of \emph{K}-space data for…

Signal Processing · Electrical Eng. & Systems 2024-10-29 Pierre-Antoine Comby , Alexandre Vignaud , Philippe Ciuciu

Neural networks (NNs) have become the state of the art in many machine learning applications, especially in image and sound processing [1]. The same, although to a lesser extent [2,3], could be said in natural language processing (NLP)…

Computation and Language · Computer Science 2019-07-30 Luka Gligic , Andrey Kormilitzin , Paul Goldberg , Alejo Nevado-Holgado

To handle the scarcity and heterogeneity of electroencephalography (EEG) data for Brain-Computer Interface (BCI) tasks, and to harness the power of large publicly available data sets, we propose Neuro-GPT, a foundation model consisting of…

Machine Learning · Computer Science 2024-03-05 Wenhui Cui , Woojae Jeong , Philipp Thölke , Takfarinas Medani , Karim Jerbi , Anand A. Joshi , Richard M. Leahy

Effective representation learning of electronic health records is a challenging task and is becoming more important as the availability of such data is becoming pervasive. The data contained in these records are irregular and contain…

Machine Learning · Computer Science 2020-05-05 Sajad Darabi , Mohammad Kachuee , Shayan Fazeli , Majid Sarrafzadeh

The widespread adoption of Electronic Health Record (EHR) systems in healthcare institutes has generated vast amounts of medical data, offering significant opportunities for improving healthcare services through deep learning techniques.…

Machine Learning · Computer Science 2024-01-23 Suhan Cui , Jiaqi Wang , Yuan Zhong , Han Liu , Ting Wang , Fenglong Ma

We have developed a graphic user interface (GUI), ExBrainable, dedicated to convolutional neural networks (CNN) model training and visualization in electroencephalography (EEG) decoding. Available functions include model training,…

Signal Processing · Electrical Eng. & Systems 2022-01-12 Ya-Lin Huang , Chia-Ying Hsieh , Jian-Xue Huang , Chun-Shu Wei

With the recent availability of Electronic Health Records (EHR) and great opportunities they offer for advancing medical informatics, there has been growing interest in mining EHR for improving quality of care. Disease diagnosis due to its…

Artificial Intelligence · Computer Science 2018-04-24 Anahita Hosseini , Ting Chen , Wenjun Wu , Yizhou Sun , Majid Sarrafzadeh

Novel non-volatile memory (NVM) technologies offer high-speed and high-density data storage. In addition, they overcome the von Neumann bottleneck by enabling computing-in-memory (CIM). Various computer architectures have been proposed to…

Cryptography and Security · Computer Science 2023-04-13 Lennart M. Reimann , Felix Staudigl , Rainer Leupers

Neurophysiological recordings such as electroencephalography (EEG) offer accessible and minimally invasive means of estimating physiological activity for applications in healthcare, diagnostic screening, and even immersive entertainment.…

Machine Learning · Computer Science 2025-10-13 Kleanthis Avramidis , Tiantian Feng , Woojae Jeong , Jihwan Lee , Wenhui Cui , Richard M Leahy , Shrikanth Narayanan

The presence of detailed clinical information in electronic health record (EHR) systems presents promising prospects for enhancing patient care through automated retrieval techniques. Nevertheless, it is widely acknowledged that accessing…

Information Retrieval · Computer Science 2024-09-13 Abderrahim Oussama Batouche , Eugen Czeizler , Miika Koskinen , Tuomas Mirtti , Antti Sakari Rannikko

NORD (Neural Operations Research & Development) is an open source distributed deep learning architectural research framework, based on PyTorch, MPI and Horovod. It aims to make research of deep architectures easier for experts of different…

Neural and Evolutionary Computing · Computer Science 2018-10-23 George Kyriakides , Konstantinos Margaritis

This article presents our steps to integrate complex and partly unstructured medical data into a clinical research database with subsequent decision support. Our main application is an integrated faceted search tool, accompanied by the…

Human-Computer Interaction · Computer Science 2018-10-31 Daniel Sonntag , Hans-Jürgen Profitlich

Emulating various facets of computing principles of the brain can potentially lead to the development of neuro-computers that are able to exhibit brain-like cognitive capabilities. In this letter, we propose a magnetoelectronic neuron that…

Emerging Technologies · Computer Science 2020-02-19 Kezhou Yang , Abhronil Sengupta

Electroencephalography (EEG) provides a non-invasive window into neural dynamics at high temporal resolution and plays a pivotal role in clinical neuroscience research. Despite this potential, prevailing computational approaches to EEG…

Signal Processing · Electrical Eng. & Systems 2026-04-03 Guoan Wang , Shihao Yang , Jun-en Ding , Hao Zhu , Feng Liu

We present here a browser-based application for visualizing patterns of connectivity in 3D stacked data matrices with large numbers of pairwise relations. Visualizing a connectivity matrix, looking for trends and patterns, and dynamically…

Neurons and Cognition · Quantitative Biology 2018-01-04 David J. Caldwell , Jing Wu , Kaitlyn Casimo , Jeffrey G. Ojemann , Rajesh P. N. Rao

The unprecedented dissemination of edge devices is accompanied by a growing demand for neuromorphic chips that can process time-series data natively without cloud support. Echo state network (ESN) is a class of recurrent neural networks…

Machine Learning · Computer Science 2025-03-04 Abdullah M. Zyarah , Alaa M. Abdul-Hadi , Dhireesha Kudithipudi

Neuromorphic engineering (NE) encompasses a diverse range of approaches to information processing that are inspired by neurobiological systems, and this feature distinguishes neuromorphic systems from conventional computing systems. The…

In this paper, we present our approach to extracting structured information from unstructured Electronic Health Records (EHR) [2] which can be used to, for example, study adverse drug reactions in patients due to chemicals in their…

Computation and Language · Computer Science 2020-01-30 Amogh Kamat Tarcar , Aashis Tiwari , Vineet Naique Dhaimodker , Penjo Rebelo , Rahul Desai , Dattaraj Rao

Electroencephalography (EEG) signals provide critical insights for applications in disease diagnosis and healthcare. However, the scarcity of labeled EEG data poses a significant challenge. Foundation models offer a promising solution by…

Machine Learning · Computer Science 2025-02-25 Limin Wang , Toyotaro Suzumura , Hiroki Kanezashi

Mining Electronic Health Records (EHRs) becomes a promising topic because of the rich information they contain. By learning from EHRs, machine learning models can be built to help human experts to make medical decisions and thus improve…

Machine Learning · Computer Science 2021-01-19 Zheng Liu , Xiaohan Li , Hao Peng , Lifang He , Philip S. Yu