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Related papers: NEMAR: An open access data, tools, and compute res…

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We present NeuralMag, a flexible and high-performance open-source Python library for micromagnetic simulations. NeuralMag leverages modern machine learning frameworks, such as PyTorch and JAX, to perform efficient tensor operations on…

Electronic Health Records (EHR) are data generated during routine clinical care. EHR offer researchers unprecedented phenotypic breadth and depth and have the potential to accelerate the pace of precision medicine at scale. A main EHR…

Quantitative Methods · Quantitative Biology 2017-04-28 Vaclav Papez , Spiros Denaxas , Harry Hemingway

The ability to use digitally recorded and quantified neurological exam information is important to help healthcare systems deliver better care, in-person and via telehealth, as they compensate for a growing shortage of neurologists. Current…

Machine Learning · Computer Science 2022-06-01 Trung-Hieu Hoang , Mona Zehni , Huaijin Xu , George Heintz , Christopher Zallek , Minh N. Do

Localizing neuronal activity in the brain, both in time and in space, is a central challenge to advance the understanding of brain function. Because of the inability of any single neuroimaging techniques to cover all aspects at once, there…

Neurons and Cognition · Quantitative Biology 2013-07-09 Yaroslav O. Halchenko , Michael Hanke , James V. Haxby , Stephen Jose Hanson , Christoph S. Herrmann

Translating neural networks from theory to clinical practice has unique challenges, specifically in the field of neuroimaging. In this paper, we present DeepNeuro, a deep learning framework that is best-suited to putting deep learning…

Computer Vision and Pattern Recognition · Computer Science 2018-08-15 Andrew Beers , James Brown , Ken Chang , Katharina Hoebel , Elizabeth Gerstner , Bruce Rosen , Jayashree Kalpathy-Cramer

The field of neuromorphic computing is in a period of active exploration. While many tools have been developed to simulate neuronal dynamics or convert deep networks to spiking models, general software libraries for learning rules remain…

Machine Learning · Computer Science 2021-08-17 Zixuan Zhao , Nathan Wycoff , Neil Getty , Rick Stevens , Fangfang Xia

Storage and retrieval of data in a computer memory plays a major role in system performance. Traditionally, computer memory organization is static - i.e., they do not change based on the application-specific characteristics in memory access…

Artificial Intelligence · Computer Science 2021-01-11 Prabuddha Chakraborty , Swarup Bhunia

Electroencephalography (EEG) is widely used for recording brain activity and has seen numerous applications in machine learning, such as detecting sleep stages and neurological disorders. Several studies have successfully shown the…

Machine Learning · Computer Science 2025-09-26 Kay Fuhrmeister , Arne Pelzer , Fabian Radke , Julia Lechinger , Mahzad Gharleghi , Thomas Köllmer , Insa Wolf

It is desirable for statistical models to detect signals of interest independently of their position. If the data is generated by some smooth process, this additional structure should be taken into account. We introduce a new class of…

Machine Learning · Computer Science 2023-08-11 Florian Heinrichs , Mavin Heim , Corinna Weber

The Center for Expanded Data Annotation and Retrieval (CEDAR) aims to revolutionize the way that metadata describing scientific experiments are authored. The software we have developed--the CEDAR Workbench--is a suite of Web-based tools and…

RNAnet provides a bridge between two widely used Human gene databases. Ensembl describes DNA sequences and transcripts but not experimental gene expression. Whilst NCBI's GEO contains actual expression levels from Human samples. RNAnet…

Molecular Networks · Quantitative Biology 2010-01-26 W. B. Langdon , Olivia Sanchez Graillet , A. P. Harrison

Neural radiance fields (NeRF) have transformed 3D reconstruction and rendering, facilitating photorealistic image synthesis from sparse viewpoints. This work introduces an explicit data reuse neural rendering (EDR-NR) architecture, which…

Magnetic resonance imaging (MRI) is one of the noninvasive imaging modalities that can produce high-quality images. However, the scan procedure is relatively slow, which causes patient discomfort and motion artifacts in images. Accelerating…

Image and Video Processing · Electrical Eng. & Systems 2023-01-18 Samira Vafay Eslahi , Jian Tao , Jim Ji

Named-entity recognition (NER) aims at identifying entities of interest in a text. Artificial neural networks (ANNs) have recently been shown to outperform existing NER systems. However, ANNs remain challenging to use for non-expert users.…

Computation and Language · Computer Science 2017-05-17 Franck Dernoncourt , Ji Young Lee , Peter Szolovits

Healthcare is becoming a more and more important research topic recently. With the growing data in the healthcare domain, it offers a great opportunity for deep learning to improve the quality of medical service. However, the complexity of…

Computation and Language · Computer Science 2021-11-01 Bo Yang , Lijun Wu

A new benchmark dataset for functional data analysis (FDA) is presented, focusing on the reconstruction of eye movements from EEG data. The contribution is twofold: first, open challenges and evaluation metrics tailored to FDA applications…

Signal Processing · Electrical Eng. & Systems 2025-04-08 Tiago Vasconcelos Afonso , Florian Heinrichs

The reconstruction of 3D objects from brain signals has gained significant attention in brain-computer interface (BCI) research. Current research predominantly utilizes functional magnetic resonance imaging (fMRI) for 3D reconstruction…

Graphics · Computer Science 2025-05-06 Xia Deng , Shen Chen , Jiale Zhou , Lei Li

The rapid growth of multimodal medical imaging data presents significant storage and transmission challenges, particularly in resource-constrained clinical settings. We propose NEURAL, a novel framework that addresses this by using…

Computer Vision and Pattern Recognition · Computer Science 2025-08-14 Devvrat Joshi , Islem Rekik

Digital services such as repositories and science gateways have become key resources for the neuroscience community, but users often have a hard time orienting themselves in the service landscape to find the best fit for their particular…

The integration of diverse clinical modalities such as medical imaging and the tabular data extracted from patients' Electronic Health Records (EHRs) is a crucial aspect of modern healthcare. Integrative analysis of multiple sources can…

Computer Vision and Pattern Recognition · Computer Science 2025-04-22 Daniel Duenias , Brennan Nichyporuk , Tal Arbel , Tammy Riklin Raviv